BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18951 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1B08 920 0.0
BF01061B1E05 127 7e-29
>BF01033A1B08
Length = 787
Score = 920 bits (464), Expect = 0.0
Identities = 467/468 (99%)
Strand = Plus / Minus
Query: 1328 tttattaatatatttcttctaatactgtacaagcaattgagactaaatgtaacacgcaaa 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tttattaatatatttcttctaatactgtacaagcaattgagactaaatgtaacacgcaaa 728
Query: 1388 aataaaaacattaatattaattttaaaactccatatatttctattcaacatataacattg 1447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aataaaaacattaatattaattttaaaactccatatatttctattcaacatataacattg 668
Query: 1448 aataacatacaatttaataatatatatttatatttttttttgtgttcgtaagcggatcct 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aataacatacaatttaataatatatatttatatttttttttgtgttcgtaagcggatcct 608
Query: 1508 ccaaggtcacaaatggaatgatatcgagctgattataattaaatgtttaggataataaat 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ccaaggtcacaaatggaatgatatcgagctgattataattaaatgtttaggataataaat 548
Query: 1568 attaaatggctttaagctatctgtatatacagcatacggcagccattttgtttggcgcga 1627
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 547 attaaatggctttaagctatctgtatatacagcatacgacagccattttgtttggcgcga 488
Query: 1628 aatttgacgcacgccaaaagtggctattaattaattataacagtgacaactaggttcgcg 1687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aatttgacgcacgccaaaagtggctattaattaattataacagtgacaactaggttcgcg 428
Query: 1688 acggttttaaaagcgaaagaagtaacattaattattattgtgtttcgcttattctaagcg 1747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acggttttaaaagcgaaagaagtaacattaattattattgtgtttcgcttattctaagcg 368
Query: 1748 gtagttgacgtgaagttccggcttgatgtcgtacacaagattcaggat 1795
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtagttgacgtgaagttccggcttgatgtcgtacacaagattcaggat 320
>BF01061B1E05
Length = 745
Score = 127 bits (64), Expect = 7e-29
Identities = 115/132 (87%)
Strand = Plus / Minus
Query: 62 ttattacctattcaataaaaaaagaatcatagaaatccggatagaaacaccaaacttata 121
|||||| ||||| ||||||||||| ||||||||||| | ||||| ||| ||||||||||
Sbjct: 386 ttattaactattttataaaaaaagattcatagaaatcggtatagagacaacaaacttata 327
Query: 122 caagaaatacgctaataagccatcgcgcgtgaatactgaatcatgctataaggattattt 181
|| |||||||| |||||||||||||||||| | |||||||| ||| ||| |||| |||||
Sbjct: 326 catgaaatacgttaataagccatcgcgcgttagtactgaataatgatattaggactattt 267
Query: 182 ttgcgtaacggt 193
||| ||||||||
Sbjct: 266 ttgggtaacggt 255
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,457
Number of extensions: 5922
Number of successful extensions: 5922
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5922
Number of HSP's successfully gapped: 2
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)