BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18953 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 163 1e-39
BF14_335_C2 137 6e-32
BF14_335_C4 129 1e-29
BF01016A2B02 105 2e-22
BF01014B2F02 101 3e-21
BF01056B2D01 100 1e-20
BF01044B1A07 98 5e-20
BF01031B2E06 84 7e-16
BF01017A1F03 78 5e-14
BF01048A1E04 78 5e-14
BF01044A1D01 76 2e-13
BF01045B1A06 72 3e-12
BF01022B1H01 70 1e-11
BF01049B1F01 70 1e-11
BF01012A1F01 68 4e-11
BF14_335_C5 68 4e-11
>BF01019A1H08
Length = 504
Score = 163 bits (82), Expect = 1e-39
Identities = 122/133 (91%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 865 tagataggggcctcttaaacctacacctg--tcgcaagtcccaggcactgttga-gctcc 921
|||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 491 tagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcc 432
Query: 922 tctctctgcaacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggt 981
|||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 431 tctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggt 372
Query: 982 ttcgtctcgtctg 994
||| |||| ||||
Sbjct: 371 ttcatctcatctg 359
>BF14_335_C2
Length = 1827
Score = 137 bits (69), Expect = 6e-32
Identities = 116/128 (90%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 865 tagataggggcctcttaaacctacacctgt--cgcaagtcccaggcactgttga-gctcc 921
||||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 934 tagataggggc-tcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcc 876
Query: 922 tctctctgcaacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggt 981
|||| |||||||||| |||||||||||| ||||||||||||||| ||| ||| ||||||
Sbjct: 875 tctccctgcaacgcggcggacccggcacccgcacggtgaatccatagaaagctaagaggt 816
Query: 982 ttcgtctc 989
||||||||
Sbjct: 815 ttcgtctc 808
Score = 87.7 bits (44), Expect = 5e-17
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 199 tagtgagctcgtaattcttattaaccttgatggcgtggtctttggggatgttggtttccc 258
|||||||||| |||| ||| || ||||||||||| |||| ||||||||||||||| | ||
Sbjct: 1158 tagtgagctcataatacttgttgaccttgatggcatggtttttggggatgttggtcttcc 1217
Query: 259 aaggaaccgtcagctctattaaatcaacgcgtttgaaaattagcgaatgcagaaatatgt 318
|||||||||| ||||||||| | |||| || |||||| |||||| |||||||||||
Sbjct: 1218 aaggaaccgtaggctctattagcgtagcgcgctttaaaattcgcgaatacagaaatatgt 1277
>BF14_335_C4
Length = 1491
Score = 129 bits (65), Expect = 1e-29
Identities = 109/120 (90%), Gaps = 4/120 (3%)
Strand = Plus / Plus
Query: 873 ggcctcttaaacctacacctg--tcgcaagtcccaggcactgttga-gctcctctctctg 929
|||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| |||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctc-ctg 1304
Query: 930 caacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggtttcgtctc 989
||||||||||| ||| ||| | ||||||||||||||| |||||||||||| |||||||||
Sbjct: 1305 caacgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
>BF01016A2B02
Length = 780
Score = 105 bits (53), Expect = 2e-22
Identities = 112/128 (87%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 865 tagataggggcctcttaaacctacacct--gtcgcaagtcccaggcactgttg-agctcc 921
|||||||||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||
Sbjct: 296 tagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcc 237
Query: 922 tctctctgcaacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggt 981
|||| || ||||||| |||||||||| ||||||||||||||| | | |||| || | ||
Sbjct: 236 tctcccttcaacgcgcgggacccggca-cagcacggtgaatccctgggatgcggacaagt 178
Query: 982 ttcgtctc 989
||||||||
Sbjct: 177 ttcgtctc 170
>BF01014B2F02
Length = 623
Score = 101 bits (51), Expect = 3e-21
Identities = 88/98 (89%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 893 gtcgcaagtcccaggcactgttga-gctcctctctctgcaacgcgatggacccggcacca 951
||||||||||| |||| ||| ||| ||||||||| ||||||||| |||||||||||||
Sbjct: 614 gtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggacccggcaccc 557
Query: 952 gcacggtgaatccattgaatgctgagaggtttcgtctc 989
|||||||| ||||| |||||||||||||||||||||||
Sbjct: 556 gcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01056B2D01
Length = 728
Score = 99.6 bits (50), Expect = 1e-20
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 900 gtcccaggcactgttga-gctcctctctctgcaacgcgatggacccggcaccagcacggt 958
||||||||| ||||||| ||||||||| |||||| | ||||||||||||||| |||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 959 gaatccattgaatgctgagaggtttcgtct 988
|||| ||| ||||| |||||||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtct 77
>BF01044B1A07
Length = 806
Score = 97.6 bits (49), Expect = 5e-20
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 894 tcgcaagtcccaggcactgttga-gctcctctctctgcaacgcgatggacccggcaccag 952
|||| |||||||| ||| ||||| ||||||||| |||| |||||||||||||| |||| |
Sbjct: 523 tcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacccgccacccg 464
Query: 953 cacggtgaatccattgaatgctgagaggtttcg 985
|||||||||||||||||| ||||||| ||||||
Sbjct: 463 cacggtgaatccattgaacgctgagaagtttcg 431
>BF01031B2E06
Length = 707
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 144 ctcccacttctaccgcgtacaaatttgcaacgaacctattcttagt 189
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 536 ctcccacttctaccgcgtacaaatttgccacgaacctattcttagt 491
>BF01017A1F03
Length = 782
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 934 gcgatggacccggcaccagcacggtgaatccattgaatgctgagaggtttcgtctcgtc 992
|||| |||||||||||| |||||||| |||||| ||||||||||||| |||||||||||
Sbjct: 291 gcgacggacccggcacccgcacggtgtatccatggaatgctgagaggattcgtctcgtc 349
>BF01048A1E04
Length = 789
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 931 aacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggtttcgtctc 989
|||||||||||||||||||| ||||||||||||||| ||| | | ||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtctc 59
>BF01044A1D01
Length = 742
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 945 ggcaccagcacggtgaatccattgaatgctgagaggtttcgtctcg 990
|||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 738 ggcacccgcacggtgaagccattgaatgctgagaggtttcgtctcg 693
>BF01045B1A06
Length = 820
Score = 71.9 bits (36), Expect = 3e-12
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 897 caagtcccaggcactgttg-agctcctctctctgcaacgcgatggacccggcaccagcac 955
||||||| ||||||||||| |||||||||| ||||||| | |||||||| ||||| |||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcat 689
Query: 956 ggtgaatccattgaat 971
||||||||| ||||||
Sbjct: 688 ggtgaatcctttgaat 673
>BF01022B1H01
Length = 596
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 955 cggtgaatccattgaatgctgagaggtttcgtctcgtct 993
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 cggtgaatccattgaatgctaagaggtttcgtctcgtct 39
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 1e-11
Identities = 60/66 (90%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 872 gggcctcttaaacctacacctg--tcgcaagtcccaggcactgttg-agctcctctctct 928
||||| |||| ||||||||||| |||||||||||||||||||||| |||||||||| ||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
Query: 929 gcaacg 934
||||||
Sbjct: 592 gcaacg 587
>BF01012A1F01
Length = 790
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 931 aacgcgatggacccggcaccagcacggtgaatccattgaatgctgagaggtttcgtct 988
|||||||| || |||| ||||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 12 aacgcgatcgagccggtaccagcacggtgaattcatggaatgctgagacgtttcgtct 69
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/73 (89%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 894 tcgcaagtcccaggcactgttg-agctcctctctctgcaacgcgatggacccggcaccag 952
|||||||||||||||||||||| |||||||||| ||||| |||| |||||||||| |
Sbjct: 1517 tcgcaagtcccaggcactgttgaagctcctctccgtgcaa--agatgcacccggcacccg 1574
Query: 953 cacggtgaatcca 965
|||||||||||||
Sbjct: 1575 cacggtgaatcca 1587
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,527
Number of extensions: 3948
Number of successful extensions: 3948
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 3934
Number of HSP's successfully gapped: 18
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)