BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18966 (UTR included)
(1138 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_684_C1 733 0.0
BF01045A1A04 628 e-180
BF14_1007_C1 567 e-161
>BF14_684_C1
Length = 1584
Score = 733 bits (370), Expect = 0.0
Identities = 376/378 (99%)
Strand = Plus / Plus
Query: 478 agatacgttatggattttcaaaggtgaagccagtgaagcggtcgtcgtcggccggcctga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agatacgttatggattttcaaaggtgaagccagtgaagcggtcgtcgtcggccggcctga 499
Query: 538 agcccaccccccgcaagaaggcgaagagcgtctcccgctccttcacggacacggacatcg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcccaccccccgcaagaaggcgaagagcgtctcccgctccttcacggacacggacatcg 559
Query: 598 ccaacgagaagccctccatgctgaaccactccttctccaagaagtccagcctgctgcacc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccaacgagaagccctccatgctgaaccactccttctccaagaagtccagcctgctgcacc 619
Query: 658 gcccctccaatatattgagacccgacacgccgccgttagacctggagaacgtgtcggaaa 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcccctccaatatattgagacccgacacgccgccgttagacctggagaacgtgtcggaaa 679
Query: 718 ccctgctggagaagaacatcaaggccagtcagatgaagttcggtttcctcggcctgggaa 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 680 ccctgctggagaagaacatcaaggccagtcagatgaagttcggtttcctcggcctgggga 739
Query: 778 tcatgggcagcggcatcgtcaagaacctgctgaactccggacacaaggtgctggtgtgga 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcatgggcagcggcatcgtcaagaacctgctgaactccggacacaaggtgctggtgtgga 799
Query: 838 acaggacagcggccaagt 855
||||||| ||||||||||
Sbjct: 800 acaggacggcggccaagt 817
>BF01045A1A04
Length = 787
Score = 628 bits (317), Expect = e-180
Identities = 333/340 (97%)
Strand = Plus / Plus
Query: 496 caaaggtgaagccagtgaagcggtcgtcgtcggccggcctgaagcccaccccccgcaaga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 caaaggtgaagccagtgaagcggtcgtcgtcggccggcctgaagcccaccccccgcaaga 507
Query: 556 aggcgaagagcgtctcccgctccttcacggacacggacatcgccaacgagaagccctcca 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aggcgaagagcgtctcccgctccttcacggacacggacatcgccaacgagaagccctcca 567
Query: 616 tgctgaaccactccttctccaagaagtccagcctgctgcaccgcccctccaatatattga 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgctgaaccactccttctccaagaagtccagcctgctgcaccgcccctccaatatattga 627
Query: 676 gacccgacacgccgccgttagacctggagaacgtgtcggaaaccctgctggagaagaaca 735
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 628 gacccgacacgccgccgttagacctggagaacgtgtcgnnnnncctgctggagaagaaca 687
Query: 736 tcaaggccagtcagatgaagttcggtttcctcggcctgggaatcatgggcagcggcatcg 795
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 688 tcaaggccagtcagatgaagtttggtttcctcggcctggggatcatgggcagcggcatcg 747
Query: 796 tcaagaacctgctgaactccggacacaaggtgctggtgtg 835
||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tcaagaacctgctgaactccggacacaaggtgctggtgtg 787
>BF14_1007_C1
Length = 2207
Score = 567 bits (286), Expect = e-161
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 853 agttagacggtgacactacgactaatagtaataataataaggacaccgacaggccgacag 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2034 agttagacggtgacactacgactaatagtaataataataaggacaccgacaggccgacag 1975
Query: 913 gggagagggggggagggccgtcggccagtgcacacaccgtcacaacaaacgacactaccg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1974 gggagagggggggagggccgtcggccagtgcacacaccgtcacaacaaacgacactaccg 1915
Query: 973 actcgcacgacacacgaactggccgacagaccgacacaccgcactagcagtagcaagtag 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 actcgcacgacacacgaactggccgacagaccgacacaccgcactagcagtagcaagtag 1855
Query: 1033 tccacgaacatatcgcacgagacgtaacacacacacggtcagacgaagtacgcgcgcaga 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 tccacgaacatatcgcacgagacgtaacacacacacggtcagacgaagtacgcgcgcaga 1795
Query: 1093 cgggccggcgcgtataacaaaacgcgcgtgtgaggccgccactaag 1138
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 cgggccggcgcgtataacaaaacgcgcgtgtgaggccgccactaag 1749
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 125,648
Number of extensions: 2806
Number of successful extensions: 2806
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2806
Number of HSP's successfully gapped: 3
Length of query: 1138
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1121
Effective length of database: 8,119,229
Effective search space: 9101655709
Effective search space used: 9101655709
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)