BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18978 (UTR included)
(4711 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1679_C1 856 0.0
BF01012A1F11 848 0.0
BF01040A2A09 250 2e-65
>BF14_1679_C1
Length = 763
Score = 856 bits (432), Expect = 0.0
Identities = 435/436 (99%)
Strand = Plus / Plus
Query: 4276 ttctgtggttacaaacgacacgtaattttttttgatagacggcatactgtcgtcgcgact 4335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctgtggttacaaacgacacgtaattttttttgatagacggcatactgtcgtcgcgact 60
Query: 4336 cgtattgtgataatgttgatagatttaaagattcgtattacatatattattgcctatatt 4395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtattgtgataatgttgatagatttaaagattcgtattacatatattattgcctatatt 120
Query: 4396 aaattatatttgttgagagtatatattgatagatatttattatggtacgtgctaagatta 4455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaattatatttgttgagagtatatattgatagatatttattatggtacgtgctaagatta 180
Query: 4456 ctcttttatatcggaaaaaggtagttgacttcgaatgttcctttgtatgtgtagaggacg 4515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcttttatatcggaaaaaggtagttgacttcgaatgttcctttgtatgtgtagaggacg 240
Query: 4516 tagttccggttaccgtaagcaccgcccatcgagtatagacgatcagttcggcttttgtaa 4575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagttccggttaccgtaagcaccgcccatcgagtatagacgatcagttcggcttttgtaa 300
Query: 4576 gatatcgtgtgacgatagaattttgttaccgaaaccgtcgcttattttgttcttatgagg 4635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatatcgtgtgacgatagaattttgttaccgaaaccgtcgcttattttgttcttatgagg 360
Query: 4636 tagagctaaagtttacttttttattttttatttttgtttacttcacatgagcttaatgtt 4695
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 tagagctaaagtttacttttttattttttatttttgtttacttcacatgaccttaatgtt 420
Query: 4696 ttttatgcttttttaa 4711
||||||||||||||||
Sbjct: 421 ttttatgcttttttaa 436
>BF01012A1F11
Length = 834
Score = 848 bits (428), Expect = 0.0
Identities = 434/436 (99%)
Strand = Plus / Plus
Query: 3482 gttcgacgagatgttcatctctgtgtacaacctgttctacacgtccctgccggtgctggc 3541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcgacgagatgttcatctctgtgtacaacctgttctacacgtccctgccggtgctggc 60
Query: 3542 tctgggtgtgttcgagcaggacgtgtccgacgccacgtccttacagttcccgaagctgta 3601
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 tctgggtgtgttcgagcaggacgtgtctgacgccacgtccttacagttcccgaagctgta 120
Query: 3602 cgcgcccggacacaccagtcagctcttcaataagacggaatttataaagtccactctaca 3661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcgcccggacacaccagtcagctcttcaataagacggaatttataaagtccactctaca 180
Query: 3662 cggatgtttcacatcgctcgtgctgttcctcataccctacgggacgtacaaggatggtct 3721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggatgtttcacatcgctcgtgctgttcctcataccctacgggacgtacaaggatggtct 240
Query: 3722 ggcgcccgatggcaagatattatccgaccacatgctcttaggaagcgtcgtggccactat 3781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcgcccgatggcaagatattatccgaccacatgctcttaggaagcgtcgtggccactat 300
Query: 3782 attaatcatagataacactacacaaatcgccctggacacgacatactggaccgtgttcaa 3841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaatcatagataacactacacaaatcgccctggacacgacatactggaccgtgttcaa 360
Query: 3842 tcatatcaccatctggggttccttggtgtcgtacttcgtgctggactacttctacaacta 3901
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacatcaccatctggggttccttggtgtcgtacttcgtgctggactacttctacaacta 420
Query: 3902 cgtgatcggtggacct 3917
||||||||||||||||
Sbjct: 421 cgtgatcggtggacct 436
Score = 452 bits (228), Expect = e-126
Identities = 234/236 (99%)
Strand = Plus / Plus
Query: 3918 cgcgccgccgccgcgcccgcaccgcgcacgccgtcggcacgccgggcgcggcgctcggtg 3977
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cgcgccgccgccgcgcccgctccgcgcacgccgtcggcacgccgggcgcggcgctcggtg 658
Query: 3978 cgttccggatacgcgttcgctcaccaggagggcttcggtcgactcatcacttccggaaag 4037
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 659 cgttccggatacgcgttcgctcaccaggagggcttcggtcgactcatcacttccgggaag 718
Query: 4038 atcatgcggcgtatcccgcacgcggacgccgccctttccgcgctggcctctctgccgggc 4097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 atcatgcggcgtatcccgcacgcggacgccgccctttccgcgctggcctctctgccgggc 778
Query: 4098 aagttccacccccgcgcgagcacgccgccgccgtctgtgtcgccctcgccctcccc 4153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aagttccacccccgcgcgagcacgccgccgccgtctgtgtcgccctcgccctcccc 834
>BF01040A2A09
Length = 423
Score = 250 bits (126), Expect = 2e-65
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 3792 gataacactacacaaatcgccctggacacgacatactggaccgtgttcaatcatatcacc 3851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gataacactacacaaatcgccctggacacgacatactggaccgtgttcaatcatatcacc 60
Query: 3852 atctggggttccttggtgtcgtacttcgtgctggactacttctacaactacgtgatcggt 3911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctggggttccttggtgtcgtacttcgtgctggactacttctacaactacgtgatcggt 120
Query: 3912 ggacct 3917
||||||
Sbjct: 121 ggacct 126
Score = 165 bits (83), Expect = 8e-40
Identities = 122/135 (90%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 3918 cgcgccgccgccgcgcccgcaccgcgcacgccgtcggcacgccg-ggcgcggcgctcggt 3976
|||||||||||||| ||||| |||| |||||||||||||| ||||||| |||||||
Sbjct: 289 cgcgccgccgccgcacccgctccgcacacgccgtcggcacnnnnaggcgcggagctcggt 348
Query: 3977 gcgttccggatacgcgttcgctcaccaggagggcttcggtcgactcatcacttccggaaa 4036
|| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||
Sbjct: 349 gcattccggatacgcgttcgctcaccagaagggcttcagtcgactcatcacttccgggaa 408
Query: 4037 gatcatgcggcgtat 4051
|||||||||||||||
Sbjct: 409 gatcatgcggcgtat 423
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 432,404
Number of extensions: 8096
Number of successful extensions: 8096
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8094
Number of HSP's successfully gapped: 5
Length of query: 4711
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4693
Effective length of database: 8,109,745
Effective search space: 38059033285
Effective search space used: 38059033285
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)