BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN18994 (UTR included)
(1447 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 123 8e-28
BF01043B1E03 98 5e-20
BF01031B2E06 80 1e-14
BF14_335_C4 72 3e-12
>BF14_335_C2
Length = 1827
Score = 123 bits (62), Expect = 8e-28
Identities = 127/148 (85%), Gaps = 3/148 (2%)
Strand = Plus / Minus
Query: 746 gagaggtataacggttaaatcactctacaacctacttaaaaacttgggcctgtccagaac 805
|||||||||||| | |||||| ||||||| |||||| ||| |||||||||||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 806 tcatatcaattcattttgggaacgtacttcgaaggcagccctagcaggtccatttcaaat 865
| | | || |||||| | ||||||||||||||| |||| |||| |||| | ||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 866 ttggttaggtagagagaggagcttggac 893
|||||||| |||||||||||||||||
Sbjct: 987 ttggttag---gagagaggagcttggac 963
>BF01043B1E03
Length = 830
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 739 tgggaatgagaggtataacggttaaatcactctacaacctacttaaaaacttgggcctgt 798
||||| || |||||||||| | | ||| |||||||||||||| ||| ||||| |||||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 799 ccagaactcatatcaattcattttgggaacgtacttcgaaggcagccctagcaggtccat 858
|||||||| | ||||| ||||| | |||||||||| | ||||||| ||| |||| |
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcct---aggtttgt 320
Query: 859 ttcaaatttggttaggtagagagaggagcttggac 893
||||||||||||||||||||||||||| |||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggac 355
>BF01031B2E06
Length = 707
Score = 79.8 bits (40), Expect = 1e-14
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 721 atttgtacgcggtagaagtgggaatgagaggtataacggttaaatcactctacaacctac 780
||||||||||||||||||||||| ||| | | ||| | |||||| ||| |||||||||
Sbjct: 513 atttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaatctctccacaacctac 572
Query: 781 ttaaaaacttgggcctgtccagaactcatatcaattcattttgggaacgtacttcgaagg 840
| |||| |||||||||||||||| || | ||||| | || || |||| |||||||||||
Sbjct: 573 taaaaaccttgggcctgtccagatctaacatcaaataatctttagaacatacttcgaagg 632
Query: 841 cagc 844
||||
Sbjct: 633 cagc 636
>BF14_335_C4
Length = 1491
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 837 aaggcagccctagcaggtccatttcaaatttggttaggtagagagaggagcttgga 892
||||||||||||||||| | |||| |||||||||||||||||||||||||||||
Sbjct: 1155 aaggcagccctagcaggatcgattcatatttggttaggtagagagaggagcttgga 1210
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,850
Number of extensions: 13224
Number of successful extensions: 13224
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 13222
Number of HSP's successfully gapped: 5
Length of query: 1447
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1430
Effective length of database: 8,119,229
Effective search space: 11610497470
Effective search space used: 11610497470
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)