BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19015 (UTR included)
(2335 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2556_C1 1532 0.0
>BF14_2556_C1
Length = 889
Score = 1532 bits (773), Expect = 0.0
Identities = 779/781 (99%)
Strand = Plus / Plus
Query: 519 gaaaattatatttattataattttatttccgtgaagacgacggtactcatttttaaggac 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gaaaattatatttattataattttatttccgtgaagacgacggtactcatttttaaggac 150
Query: 579 gtcattctcacgaaaatgctgagattcggagttattttgttactcgggttttcaactaca 638
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtcattctcatgaaaatgctgagattcggagttattttgttactcgggttttcaactaca 210
Query: 639 gtgaacagtcaatgctttaccaaagatgacgcttcaaagaaactaaatgcggaggcgaga 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtgaacagtcaatgctttaccaaagatgacgcttcaaagaaactaaatgcggaggcgaga 270
Query: 699 gcaacattgtataaaaatcagttggaatttacattaaatctcttcaatgtgatcaacgag 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gcaacattgtataaaaatcagttggaatttacattaaatctcttcaatgtgatcaacgag 330
Query: 759 gctgttcctaatgacaacgtattcttctcacctttctccgtataccacgccctacttctt 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gctgttcctaatgacaacgtattcttctcacctttctccgtataccacgccctacttctt 390
Query: 819 ggatattttgctgctggtggtcaaacagaaaaagcattgaaagaatcactgcgcatcgct 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggatattttgctgctggtggtcaaacagaaaaagcattgaaagaatcactgcgcatcgct 450
Query: 879 gacacgcaggacaaggtgaacctgttgatggcatacaaagtggacaaacatttgcgggcc 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gacacgcaggacaaggtgaacctgttgatggcatacaaagtggacaaacatttgcgggcc 510
Query: 939 gtgaacaacaacagcgacagctatgagttcacaaacgttaataagatgttcgttgacaca 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gtgaacaacaacagcgacagctatgagttcacaaacgttaataagatgttcgttgacaca 570
Query: 999 gcgcttcaagtcagagaatgcttcaaagatgcctttggtggcgaaatatcgggcctgaat 1058
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 571 gcgcttcaagtcagagaatgcttcaaagatgcctttggtggcgaattatcgggcctgaat 630
Query: 1059 ttccacgatcaccctggagttgctgtaggacatatcaacgagtgggtggcccacgtcact 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ttccacgatcaccctggagttgctgtaggacatatcaacgagtgggtggcccacgtcact 690
Query: 1119 aaaaacaatatcaaagacctcattcctccttctggcgtaacccaagcaaccaagctcgtt 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaaaacaatatcaaagacctcattcctccttctggcgtaacccaagcaaccaagctcgtt 750
Query: 1179 ctcgccaacgcagcttacttcaagggcgtctgggcatcaaaattccaagctcaaagcacc 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ctcgccaacgcagcttacttcaagggcgtctgggcatcaaaattccaagctcaaagcacc 810
Query: 1239 aaaaaacaagtattcttcgtctcggaaacccgtcagaccctcacacattttatgagacaa 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aaaaaacaagtattcttcgtctcggaaacccgtcagaccctcacacattttatgagacaa 870
Query: 1299 a 1299
|
Sbjct: 871 a 871
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 342,406
Number of extensions: 8748
Number of successful extensions: 8748
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8748
Number of HSP's successfully gapped: 1
Length of query: 2335
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2318
Effective length of database: 8,119,229
Effective search space: 18820372822
Effective search space used: 18820372822
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)