BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19016 (UTR included)
(5101 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1F12 1624 0.0
>BF01038B1F12
Length = 831
Score = 1624 bits (819), Expect = 0.0
Identities = 822/823 (99%)
Strand = Plus / Plus
Query: 3709 gtttgatgctgctggatcgttccggccaaggaaaggtgtatcagttgatctcaagacgcc 3768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtttgatgctgctggatcgttccggccaaggaaaggtgtatcagttgatctcaagacgcc 68
Query: 3769 gcttccaacagatggaagtgctagaaggccaaaatatactcgtcactgtttctggaaaaa 3828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcttccaacagatggaagtgctagaaggccaaaatatactcgtcactgtttctggaaaaa 128
Query: 3829 agaaccgcgttcgtgtctactacttgagctggttaaaatcaaagattttgcgtactgatg 3888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agaaccgcgttcgtgtctactacttgagctggttaaaatcaaagattttgcgtactgatg 188
Query: 3889 gcttaagcgaccaagttgaacggaggaatggctggattaacgtaggagaattacagggcg 3948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gcttaagcgaccaagttgaacggaggaatggctggattaacgtaggagaattacagggcg 248
Query: 3949 ccgttcatttccgtatagtgaagtatgagcgcatcaagttcctcgtgatcgctcttaaag 4008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccgttcatttccgtatagtgaagtatgagcgcatcaagttcctcgtgatcgctcttaaag 308
Query: 4009 actccatcgagatctatgcgtgggctcccaaaccatatcacaaatttatggcctttaaaa 4068
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 309 actccatcgagatctatgcgtgggctcgcaaaccatatcacaaatttatggcctttaaaa 368
Query: 4069 gttttggggacttgcaacatagacctctactagttgacctaactatcgaggaaggtacaa 4128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gttttggggacttgcaacatagacctctactagttgacctaactatcgaggaaggtacaa 428
Query: 4129 gactgaaagtaatttacggttcagcggacggtttccacgctgttgatctcgatactgcca 4188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gactgaaagtaatttacggttcagcggacggtttccacgctgttgatctcgatactgcca 488
Query: 4189 gtgtatatgatatttatattccaaagcatacgcaaggagcaattgttccgcattgcatag 4248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgtatatgatatttatattccaaagcatacgcaaggagcaattgttccgcattgcatag 548
Query: 4249 taccattgcctaattcaaatggtgtccaactattgttatgctatgataatgaaggcgtat 4308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 taccattgcctaattcaaatggtgtccaactattgttatgctatgataatgaaggcgtat 608
Query: 4309 acgtaaatacttatggtagggttagcaaaaatatagttctgcagtggggcgagatgccta 4368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 acgtaaatacttatggtagggttagcaaaaatatagttctgcagtggggcgagatgccta 668
Query: 4369 cttcggtcgcctacataggaactggccaaataatgggttggggcaataaagccattgaaa 4428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cttcggtcgcctacataggaactggccaaataatgggttggggcaataaagccattgaaa 728
Query: 4429 tacgatccgtagagagtgggcatcttgacggtgtgtttatgcacaaaaaagcccaacgtc 4488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tacgatccgtagagagtgggcatcttgacggtgtgtttatgcacaaaaaagcccaacgtc 788
Query: 4489 tcaagtttttatgtgaacgtaatgacaaggtattcttctcatc 4531
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tcaagtttttatgtgaacgtaatgacaaggtattcttctcatc 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 522,377
Number of extensions: 9418
Number of successful extensions: 9418
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9418
Number of HSP's successfully gapped: 1
Length of query: 5101
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5083
Effective length of database: 8,109,745
Effective search space: 41221833835
Effective search space used: 41221833835
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)