BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19025 (UTR included)
(890 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3110_C1 981 0.0
>BF14_3110_C1
Length = 770
Score = 981 bits (495), Expect = 0.0
Identities = 510/515 (99%)
Strand = Plus / Plus
Query: 342 atagacacttcgtttctttagtgcgtactgtaagcattcgatattcctgtgatcaaattt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagacacttcgtttctttagtgcgtactgtaagcattcgatattcctgtgatcaaattt 61
Query: 402 tatattaaaaattgagagaatcgcgatgttaaattgcttaagctggatagtatatcgttg 461
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tatattaaaaattcagagaatcgcgatgttaaattgcttaagctggatagtatatcgttg 121
Query: 462 aaagtgaaatcttcacagtttataacaaataatacgaaaatggacatcgaagagtgtctt 521
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaagtgtaatcttcacagtttataacaaataatacgaaaatggacatcgaagagtgtctt 181
Query: 522 aaagagtgggaagatttattagccgactacaaacgattagagacggttaacaaggaatat 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaagagtgggaagatttattagccgactacaaacgattagagacggttaacaaggaatat 241
Query: 582 gccaccaaattagaggaagtaggtgaactgcagtcatcatgtttgaaggagttgacccac 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gccaccaaattagaggaagtaggtgaactgcagtcatcatgtttgaaggagttgacccac 301
Query: 642 cagcgttatcggatgtctattataactggcaccctcaaaagattggagaaaaagggcgtg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cagcgttatcggatgtctattataactggcaccctcaaaagattggagaaaaagggcgtg 361
Query: 702 acaaaggatgaacgcatagcaaatttagaaaaggaaatcatgaagagaaaagccatgctc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acaaaggatgaacgcatagcaaatttagaaaaggaaatcatgaagagaaaagccatgctc 421
Query: 762 catgaaattgaggcgaccctacctaaacagaacagcatgtacctcaagatcatactgggc 821
||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||
Sbjct: 422 catgaaattgaggcgacactacctaaacagaacagcctctacctcaagatcatactgggc 481
Query: 822 aatgtcaacgtatcaatactcaataaaaatgacaa 856
|||||||||||||||||||||||||||||||||||
Sbjct: 482 aatgtcaacgtatcaatactcaataaaaatgacaa 516
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 118,282
Number of extensions: 2160
Number of successful extensions: 2160
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2160
Number of HSP's successfully gapped: 1
Length of query: 890
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 873
Effective length of database: 8,119,229
Effective search space: 7088086917
Effective search space used: 7088086917
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)