BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19051 (UTR included)
(2341 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2237_C1 2979 0.0
>BF14_2237_C1
Length = 1571
Score = 2979 bits (1503), Expect = 0.0
Identities = 1554/1571 (98%)
Strand = Plus / Plus
Query: 518 cctcgcgatcgtcgctgccgcagcggcacaaggggatcagccccggaagccgactcatag 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctcgcgatcgtcgctgccgcagcggcacaaggggatcagccccggaagccgactcatag 60
Query: 578 agaacaattcagagtcatctatgagtggcgcagtatagacttcgagtgggaatcacccga 637
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaacaattcagagtcatctatgagtggcgcagtatagacttcgagtgggaatcacccga 120
Query: 638 agaccgtgatgcctatcttaactccagccgatacatcccacaaaacgttttaatatcagg 697
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaccgtgatggctatcttaactccagccgatacatcccacaaaacgttttaatatcagg 180
Query: 698 aataaattactatgaaaataacatattcttaacactaccccgtatgctggacggcgttcc 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaattactatgaaaataacatattcttaacactaccccgtatgctggacggcgttcc 240
Query: 758 cgctaccctagcgaccataccggccttccaaaatgaaacaacggcaccaaaattgaaacc 817
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgctactctagcgaccataccggccttccaaaatgaaacaacggcaccaaaattgaaacc 300
Query: 818 cttccccagttggaaggacaatgccgtagggaattgcgaatctctacaattcgttcaaaa 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttccccagttggaaggacaatgccgtagggaattgcgaatctctacaattcgttcaaaa 360
Query: 878 cgttgaaattgaccggaatggaattatgtggattctggacaacggacgcattggcaccct 937
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 tattgaaattgaccggaatggaattatgtggattctggacaacggccgcattggcaccct 420
Query: 938 tacatcgagaccaaactccaagtgtccaccttcgatagttttaatcgatttaaaatcagg 997
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacgtcgagaccaaactccaagtgtccaccttcgatagttttaatcgatttaaaatcagg 480
Query: 998 tgaaaataaattagaacgcataccattttccttggacgtagtgaaccctaatacagcata 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgaaaataaattagaacgcataccattttccttggacgtagtgaaccctaatacagcata 540
Query: 1058 cttgaacgacctagttgttgataatcgcgacggtgacttcgcatacattaccgacaacag 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttgaacgacctagttgttgataatcgcgacggtgacttcgcatacattaccgacaacag 600
Query: 1118 cgctgtcgaccccggcatcatcgtatttagactgagcgacaaaaaatcatggaaattaag 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgctgtcgaccccggcatcatcgtatttagactgagcgacaaaaaatcatggaaattaag 660
Query: 1178 agacactaagtcaatgtcttcgttaccagaggctgcgatattccgtatcaatggcaccac 1237
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 agacactaagtcaatgtcttcgttaccagaggctgcgatattccgcatcaatggcaccac 720
Query: 1238 tgtgaatttacctgtaaacattgacgggatcgccctcgggccacaattttacacagaaga 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtgaatttacctgtaaacattgacgggatcgccctcgggccacaattttacacagaaga 780
Query: 1298 taaagctgtcgaccgaaccgtctactactgcccgctgtcaagttttcacctttacgcaat 1357
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 781 taaagctgtcgaccgaactgtctactactgcccgctgtcaagttttcacctttatgcaat 840
Query: 1358 taacgcttcggttctgcagaacgaatcgtttgctgtaggcaatggagctatcggtccgta 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 taacgcttcggttctgcagaacgaatcgtttgctgtaggcaatggagctatcggtccgta 900
Query: 1418 tgtagtcgatctgggtaccaaggcgtctcagacggacggtatgaagatggattccactgg 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tgtagtcgatctgggtaccaaggcgtctcagacggacggtatgaagatggattccactgg 960
Query: 1478 catactctttttcggtctgattggtaactcgactattgcggaatggaacacagcaacaga 1537
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 961 catactctttttcggtctgattggtaacttgactattgcggaatggaacacagcaacaga 1020
Query: 1538 tttttcaataggtcagcggactatcgcccgcgatcctaactacatacagtgggttgaccg 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tttttcaataggtcagcggactatcgcccgcgatcctaactacatacagtgggttgaccg 1080
Query: 1598 tttcagtttcgacgaccgcggtaacgtttacgtcgttgtaaacagacttcacaactttgt 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tttcagtttcgacgaccgcggtaacgtttacgtcgttgtaaacagacttcacaactttgt 1140
Query: 1658 gaaaaatcaagtatcattggacgaagtcaattacagaattcttaagtcttatacgggttt 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gaaaaatcaagtatcattggacgaagtcaattacagaattcttaagtcttatacgggttt 1200
Query: 1718 gaaaagctacgtattcggtgaagatcttcaaccagagtcacccgtgccaacgcacggtgc 1777
|||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct: 1201 gaaaagctacgtattcggtgaagaccttcaaccagagacacccgtgccgccgcacggtgc 1260
Query: 1778 ctcatcggctacaaaacttgtagcttccatggtgttgctagctttagcacatctaatcgc 1837
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1261 ctcatcggctacaaaacttgtagcttccatggtgttgctagctttagcacatctactcgc 1320
Query: 1838 ttagtactttggacattctcggtcgaacttgaccgtaagaatgaacctaaatacgctcag 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttagtactttggacattctcggtcgaacttgaccgtaagaatgaacctaaatacgctcag 1380
Query: 1898 tgtgcgtgtaaattaccaaatattaaaagttaccttgaccttaaggtcttttcagtgata 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tgtgcgtgtaaattaccaaatattaaaagttaccttgaccttaaggtcttttcagtgata 1440
Query: 1958 aagcgcaatatagatagctttgtatattataattttataataaataagtgtaactgtaac 2017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 aagcgcaatatagatagctttgtatattataattttataataaataagtgtaactgtaac 1500
Query: 2018 ttaacgataatatgatatcactttttgaacgtttgtaaaacgtgttcaagacgatccgag 2077
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 ttaacgataatatgatatcactttttgaacgtttgtaaaacgtgttcaagacgatccgaa 1560
Query: 2078 tcgtcttgtga 2088
|||||||||||
Sbjct: 1561 tcgtcttgtga 1571
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,132
Number of extensions: 4522
Number of successful extensions: 4522
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4522
Number of HSP's successfully gapped: 1
Length of query: 2341
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2324
Effective length of database: 8,119,229
Effective search space: 18869088196
Effective search space used: 18869088196
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)