BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19062 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B1A03 1378 0.0
>BF01028B1A03
Length = 745
Score = 1378 bits (695), Expect = 0.0
Identities = 731/745 (98%)
Strand = Plus / Plus
Query: 373 taagcattatttaccttataattccatttataattataatttatgatctcaactgaagct 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taagcattatttaccttataattccatttataattataatttatgatctcaactgaagct 60
Query: 433 attagctcgcctaatcagatattatgtgcagctactgatagtgataacaccactggctta 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attagctcgcctaatcagatattatgtgcagctactgatagtgataacaccactggctta 120
Query: 493 tacataaaatgtatatttatatatttatatttgtattcattatattatcaccgcaaataa 552
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 tacataaaatgtatatttatatatttatatttgtattcatgatattatcaccgcaaataa 180
Query: 553 tagcgatggttcctacaattatcgttcatggcggagctggggatattcctgggagtaggg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagcgatggttcctacaattatcgttcatggcggagctggggatattcctgggagtaggg 240
Query: 613 tggaaggaaaattgaaaggtgtgaaacttgcagcagttattggacagagaatattatctg 672
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagaaggaaaattgaaaggtgtaaaacttgcagcagttattggacagagaatattatctg 300
Query: 673 agggaggcagtgctctagatgctgtagaggctgcagtcgtttcaatggaaaatgatgaat 732
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggaggtagtgctctagatgctgtagaggctgcagtcgtttcaatggaaaatgatgaat 360
Query: 733 attttaatgcaggatatggatccgttttaaatttacgtggagaagttgaaatggaggcta 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attttaatgcaggatatggatccgttttaaatttacgtggagaagttgaaatggaggcta 420
Query: 793 gtataatgtgtggaaaggatttaaatgttggcgctgtaactttgattaaagaatttttac 852
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 gtataatgtgtggaaaggatttaaatgttggcgctgtaactttgattaaagattttttac 480
Query: 853 atcccataagcatagctcataaagttctgactgactccccacattcattactgggcggcg 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcccataagcatagctcataaagttctgactgactccccacattcattactgggcggcg 540
Query: 913 aaggggccaaattatttgcacttgagaagggtttttcacctgttcctccagaatctttaa 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaggggccaaattatttgcacttgagaagggtttttcacctgttcctccagaatctttaa 600
Query: 973 taagtgaacatgccagggctgctttaaattctttcttggaacatggggaatttggtagga 1032
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 601 taagtgaacatgccagggctgctttaaaatctttcttggaacatggggaatttggtagga 660
Query: 1033 ctgaaatcggaatggacactaaaagtgacgtagggactgtaggtgcagtggcccttgatt 1092
|||||||| |||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 661 ctgaaatcagaatggacactaaaagtgacgtnnngactgtnnntgcagtggcccttgatt 720
Query: 1093 gtaaaggtcatatagctgtagcaac 1117
|||| ||||||||||||||||||||
Sbjct: 721 gtaatggtcatatagctgtagcaac 745
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,480
Number of extensions: 8405
Number of successful extensions: 8405
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8405
Number of HSP's successfully gapped: 1
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)