BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19072 (UTR included)
(2053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2F07 1150 0.0
BF01059A1E12 1142 0.0
>BF01016B2F07
Length = 677
Score = 1150 bits (580), Expect = 0.0
Identities = 580/580 (100%)
Strand = Plus / Plus
Query: 311 agtagatcgccgacgtaggtcgcggtcccgagaacgtcgccgctcacgttcccggtccag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 agtagatcgccgacgtaggtcgcggtcccgagaacgtcgccgctcacgttcccggtccag 88
Query: 371 agaacgccgtgagaaaagaagaagcaagtcgaggtctccttctaaaagatcacgcagacg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 agaacgccgtgagaaaagaagaagcaagtcgaggtctccttctaaaagatcacgcagacg 148
Query: 431 caagccctctctatactgggatgtaccacctcccgggttcgaacacattacaccattaca 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caagccctctctatactgggatgtaccacctcccgggttcgaacacattacaccattaca 208
Query: 491 atacaaggccatgcaggcagcaggccaaatcccggcaaacatagtagcagatacaccaca 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atacaaggccatgcaggcagcaggccaaatcccggcaaacatagtagcagatacaccaca 268
Query: 551 ggctgctgtgccagtagtagggtccacaataactagacaagcaagaagattatatgtagg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggctgctgtgccagtagtagggtccacaataactagacaagcaagaagattatatgtagg 328
Query: 611 gaacataccatttggtgtcacagaagaggaaacaatggagttctttaatcagcaaatgca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaacataccatttggtgtcacagaagaggaaacaatggagttctttaatcagcaaatgca 388
Query: 671 tctttctggtttggctcaagctgcgggcaaccctgttttagcgtgtcagataaacttaga 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tctttctggtttggctcaagctgcgggcaaccctgttttagcgtgtcagataaacttaga 448
Query: 731 taaaaactttgcattccttgagtttagatctattgatgagactacacaggccatggcatt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taaaaactttgcattccttgagtttagatctattgatgagactacacaggccatggcatt 508
Query: 791 tgatggcattaattttaagggtcaaagtttgaaaataaggcgacctcatgactatcaacc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgatggcattaattttaagggtcaaagtttgaaaataaggcgacctcatgactatcaacc 568
Query: 851 aatgccaggaaccgaaaacccagcaatcaatgtacctgct 890
||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aatgccaggaaccgaaaacccagcaatcaatgtacctgct 608
>BF01059A1E12
Length = 759
Score = 1142 bits (576), Expect = 0.0
Identities = 579/580 (99%)
Strand = Plus / Plus
Query: 311 agtagatcgccgacgtaggtcgcggtcccgagaacgtcgccgctcacgttcccggtccag 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 agtagatcgccgacgtaggtcgcggtcccgagaacgtcgccgctcacgttcccggtccag 129
Query: 371 agaacgccgtgagaaaagaagaagcaagtcgaggtctccttctaaaagatcacgcagacg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agaacgccgtgagaaaagaagaagcaagtcgaggtctccttctaaaagatcacgcagacg 189
Query: 431 caagccctctctatactgggatgtaccacctcccgggttcgaacacattacaccattaca 490
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 190 caagccctctctatactgggatgtacctcctcccgggttcgaacacattacaccattaca 249
Query: 491 atacaaggccatgcaggcagcaggccaaatcccggcaaacatagtagcagatacaccaca 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atacaaggccatgcaggcagcaggccaaatcccggcaaacatagtagcagatacaccaca 309
Query: 551 ggctgctgtgccagtagtagggtccacaataactagacaagcaagaagattatatgtagg 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggctgctgtgccagtagtagggtccacaataactagacaagcaagaagattatatgtagg 369
Query: 611 gaacataccatttggtgtcacagaagaggaaacaatggagttctttaatcagcaaatgca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaacataccatttggtgtcacagaagaggaaacaatggagttctttaatcagcaaatgca 429
Query: 671 tctttctggtttggctcaagctgcgggcaaccctgttttagcgtgtcagataaacttaga 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tctttctggtttggctcaagctgcgggcaaccctgttttagcgtgtcagataaacttaga 489
Query: 731 taaaaactttgcattccttgagtttagatctattgatgagactacacaggccatggcatt 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 taaaaactttgcattccttgagtttagatctattgatgagactacacaggccatggcatt 549
Query: 791 tgatggcattaattttaagggtcaaagtttgaaaataaggcgacctcatgactatcaacc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgatggcattaattttaagggtcaaagtttgaaaataaggcgacctcatgactatcaacc 609
Query: 851 aatgccaggaaccgaaaacccagcaatcaatgtacctgct 890
||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aatgccaggaaccgaaaacccagcaatcaatgtacctgct 649
Score = 224 bits (113), Expect = 4e-58
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1182 gctatgacaggggctgctccggtgactcttcaagtggcagggctgacattggctggtgca 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gctatgacaggggctgctccggtgactcttcaagtggcagggctgacattggctggtgca 706
Query: 1242 ggccctgccacagaggtactctgcctcctgaacatggttacaccggatgagct 1294
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ggccctgccacagaggtactctgcctcctgaacatggttacaccggatgagct 759
Score = 141 bits (71), Expect = 5e-33
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 169 ttaacaatttcatgaagacttagatttcattgctaaacaatacaaattaataaatatggg 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaacaatttcatgaagacttagatttcattgctaaacaatacaaattaataaatatggg 60
Query: 229 tgaagataaag 239
|||||||||||
Sbjct: 61 tgaagataaag 71
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,302
Number of extensions: 4553
Number of successful extensions: 4553
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4553
Number of HSP's successfully gapped: 4
Length of query: 2053
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2036
Effective length of database: 8,119,229
Effective search space: 16530750244
Effective search space used: 16530750244
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)