BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19115 (UTR included)
(1294 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1774_C1 1360 0.0
>BF14_1774_C1
Length = 965
Score = 1360 bits (686), Expect = 0.0
Identities = 741/758 (97%), Gaps = 1/758 (0%)
Strand = Plus / Plus
Query: 537 gttaaacaacaatcagaaaccatgaacgtgatgccagtgggtccttccgctaccaatctg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gttaaacaacaatcagaaaccatgaacgtgatgccagtgggtccttccgctaccaatctg 97
Query: 597 atatgcccatcctgccgcgccagtatagtcagcaggattcaacataaagccactacgaaa 656
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 98 atatgcccatcctgccgcgccagtatagtcagcaggattcaatataaagccactacgaga 157
Query: 657 acgcatatcatggctcttctattatgtttgtgtctatgctggccctgtgtatgtgtaccg 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acgcatatcatggctcttctattatgtttgtgtctatgctggccctgtgtatgtgtaccg 217
Query: 717 tactgtgtagattcctgtcaaaatactgatcattactgtcctagttgtgacgcttatctt 776
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 218 tactgtgtagattcctgtcaaaatgctgatcattactgtcccagttgtgacgcttatctt 277
Query: 777 ggaacatatgctggataggaaaaaaaaaactataatataattaaacgcaggttatctata 836
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 278 ggaacatatgctggataggaaaaaaaaat-tataatataatcaaacgcaggttatctata 336
Query: 837 aacaatttaaactattaaaaaatctcacagctttcatcggttactttaaattctcaacgg 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aacaatttaaactattaaaaaatctcacagctttcatcggttactttaaattctcaacgg 396
Query: 897 aaaatttaaatgcaccagcaaaggaaatgaaggcgccatatctccggggtattgtagcaa 956
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 397 aaaatttaaatgcaccagcaaaggaaatgaagcggccatatctccggggtattgtagcaa 456
Query: 957 cgttccattggcttggaacctgatcggaaatctgagtttccatatagttgtgcctatact 1016
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 457 cgtttcattggcttggaacctggtcggaaatctgagtttccatatagttgtgcctatact 516
Query: 1017 tgagtatccttagaatggttccttattaagaaaactgttgcctacgtattatggaacata 1076
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 517 tgagtatccttagaatggttacttattaagaaaactgttgcctacgtattatcgaacata 576
Query: 1077 aatacatatggttagctggaaactttaaatgaatagttaaaattcaataacattttgcta 1136
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 577 tatacatatggttagccggaaactttaaatgaatagttaaaattcaataacattttacta 636
Query: 1137 ataacgtaaacatgttgccgcatggtggatcaatctgttttttgtataacatttacattc 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ataacgtaaacatgttgccgcatggtggatcaatctgttttttgtataacatttacattc 696
Query: 1197 acatagttctaaagtgaaaaaatctctttatcttcaatgcattttgaagttatatgtgaa 1256
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 697 acatagttctaaagtgaaaaaatctctttatcttcaatgcatcttgaagttatatgtgaa 756
Query: 1257 ttttgtgaaacacgaatcgcacttaaattttaaacgct 1294
||||||||||||||||||||||||||||||||||||||
Sbjct: 757 ttttgtgaaacacgaatcgcacttaaattttaaacgct 794
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,694
Number of extensions: 4632
Number of successful extensions: 4632
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4631
Number of HSP's successfully gapped: 1
Length of query: 1294
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1277
Effective length of database: 8,119,229
Effective search space: 10368255433
Effective search space used: 10368255433
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)