BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19122 (UTR included)
(2506 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B1C11 1558 0.0
>BF01056B1C11
Length = 805
Score = 1558 bits (786), Expect = 0.0
Identities = 789/790 (99%)
Strand = Plus / Plus
Query: 1412 tgcttcatttctggctcttttccgaacaccacgtcttcgagctcgaactattgctatttg 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcatttctggctcttttccgaacaccacgtcttcgagctcgaactattgctatttg 60
Query: 1472 ctttaattggtttgtctgcggattctgtttctttggagtgtcacaatacatcggacacgt 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttaattggtttgtctgcggattctgtttctttggagtgtcacaatacatcggacacgt 120
Query: 1532 gtccggtaatatattcttcaacgtcgcaatctcagctgccatactagtaccaggaaccct 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtccggtaatatattcttcaacgtcgcaatctcagctgccatactagtaccaggaaccct 180
Query: 1592 tatctcgatttatacgaacagagtccttggtagaaagataactcttatcagttcaaactg 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatctcgatttatacgaacagagtccttggtagaaagataactcttatcagttcaaactg 240
Query: 1652 tgtgacgggtcttagctgtcttctcattatcttcgtgccacagtctttggccagccactt 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgacgggtcttagctgtcttctcattatcttcgtgccacagtctttggccagccactt 300
Query: 1712 gacccttggatgcttcgggttatttggaatgagtatatcgttcgcgacagtttatttgta 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gacccttggatgcttcgggttatttggaatgagtatatcgttcgcgacagtttatttgta 360
Query: 1772 cgcaggggaattatttccaactgttgtacgaaattccggcgtcgggctatcatccaccgt 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgcaggggaattatttccaactgttgtacgaaattccggcgtcgggctatcatccaccgt 420
Query: 1832 ggcaaggataggctctatggtagctccatttgtggcaactcttgctcataccagtgccat 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggcaaggataggctctatggtagctccatttgtggcaactcttgctcataccagtgccat 480
Query: 1892 tttgccacctctactttttggtatagtacctctcataggttcctgcctatgtattatatt 1951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgccacctctactttttggtatagtacctctcataggttcctgcctatgtattatatt 540
Query: 1952 accagatactagaggaaagaaattacccgatactttggaggagggcgaagtgtaatgtga 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accagatactagaggaaagaaattacccgatactttggaggagggcgaagtgtaatgtga 600
Query: 2012 taaccaaattcaagctttaattgtgaaacaaataaagtatttattacaatttttgtatta 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taaccaaattcaagctttaattgtgaaacaaataaagtatttattacaatttttgtatta 660
Query: 2072 taacgtaatcataagttttgctttgtaaaaatattgtaagtttctgtaagtcatataaat 2131
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 661 taacgtaatcataagttttgctttgtaaaaatattgtaagtttctgttagtcatataaat 720
Query: 2132 taagtcttttttaaggaaataaaatatgttacaaattctattgaaatagattgtgatatc 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taagtcttttttaaggaaataaaatatgttacaaattctattgaaatagattgtgatatc 780
Query: 2192 tgaaagatta 2201
||||||||||
Sbjct: 781 tgaaagatta 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,061
Number of extensions: 21031
Number of successful extensions: 21031
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21031
Number of HSP's successfully gapped: 1
Length of query: 2506
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2489
Effective length of database: 8,119,229
Effective search space: 20208760981
Effective search space used: 20208760981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)