BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19126 (UTR included)
(2659 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2G12 1485 0.0
>BF01025B2G12
Length = 785
Score = 1485 bits (749), Expect = 0.0
Identities = 776/785 (98%)
Strand = Plus / Plus
Query: 643 tgtgtgcatcatgcaacaggtggtatcatgagtcttgtataggatatcagttgggaaaac 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtgtgcatcatgcaacaggtggtatcatgagtcttgtataggatatcagttgggaaaac 60
Query: 703 tggtaccatttatgacgaattacctcttcatatgtaagaactgttcaccaactggtttgg 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtaccatttatgacgaattacctcttcatatgtaagaactgttcaccaactggtttgg 120
Query: 763 aaacatttaaaaagaatcaagctcctttccctcaaatgtgcctgactgcaattgcaaacc 822
|||| ||||||||||||||||||||||||||||||||||||||||| || || |||||||
Sbjct: 121 aaacttttaaaaagaatcaagctcctttccctcaaatgtgcctgaccgctatagcaaacc 180
Query: 823 tcaagcaagagagtgccaaagatggcactaataggatcttattcagtaaagatagagaga 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaagcaagagagtgccaaagatggcactaataggatcttattcagtaaagatagagaga 240
Query: 883 taattccctatatagatcaatattgggaagccatgacaactatgccaaggagggtgaccc 942
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taattccctatatagaccaatattgggaagccatgacaactatgccaaggagggtgaccc 300
Query: 943 aatcttggtatgcaacagtgcaaagagctcttattaaagatattcaagtgctgtttattt 1002
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatcttggtatgcaacagtacaaagagctcttattaaagatattcaagtgctgtttattt 360
Query: 1003 atgaagaggatcagtcccaagggccaatgttcggtttattcaatatggaattgactaata 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgaagaggatcagtcccaagggccaatgttcggtttattcaatatggaattgactaata 420
Query: 1063 tcaagcccaattatgaagccatgatcaagcaagggcaactcaaggtcaccgacatgggaa 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcaagcccaattatgaagccatgatcaagcaagggcaactcaaggtcaccgacatgggaa 480
Query: 1123 ttgcaacagttcaactagccggtaacgtaaagggtcgccaaggtaagcgtcgtccggtag 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgcaacagttcaactagccggtaacgtaaagggtcgccaaggtaagcgtcgtccggtag 540
Query: 1183 gagtggaaacaagcgcccccgtcggcaagaaaggtcgatcagctgatttgggcgctctaa 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagtggaaacaagcgcccccgtcggcaagaaaggtcgatcagctgatttgggcgctctaa 600
Query: 1243 aactaccctcccacggctatccgaccgaacatccgttcaataaagatggataccgctaca 1302
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aactaccctcccacggctacccgaccgaacatccgttcaataaagatggataccgctaca 660
Query: 1303 tactagctgaacccgatccacacgccccgttcagacaggagtttgatgagagcaacgaat 1362
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 661 tactagctgaacccgatccacacgccccgttcagacaggagttcgatgagagcaacgaat 720
Query: 1363 ggtccgggaagccgatcccgggctggttgtaccggtcgctgtgtcccgggatagtgttgc 1422
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtctgggaagccgatcccgggctggttgtaccggtcgctgtgtcccgggatagtgttgc 780
Query: 1423 tggcg 1427
|||||
Sbjct: 781 tggcg 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,677
Number of extensions: 9154
Number of successful extensions: 9154
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9154
Number of HSP's successfully gapped: 1
Length of query: 2659
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2642
Effective length of database: 8,119,229
Effective search space: 21451003018
Effective search space used: 21451003018
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)