BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19129 (UTR included)
(2056 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1H10 1090 0.0
>BF01050B1H10
Length = 727
Score = 1090 bits (550), Expect = 0.0
Identities = 565/570 (99%)
Strand = Plus / Plus
Query: 528 tcaatttcaaacgcgttgggtatagagtgggctccactcaatgtaccaacgtcaagacgc 587
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 158 tcaatttcaaacgcgttgggtatagagtgggctcccctcaatgtaccaacgtcaagacgc 217
Query: 588 ctcgaaacattagctgcagcagcttggatctgtctcgtgttattcggtgaagcagcttgt 647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 218 ctcgaaacattagctgcagcagcttggatctgtctcgtgttattcggtgaagcagcatgt 277
Query: 648 atcttattattcgtacagcttgtgtactcctcatattggtatctagtacttttatatggc 707
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 278 atcttattattcgtacagcttgtgtactcctcatattggtatctagtacttttatacggc 337
Query: 708 atttggatgttgaatgaccttgaaatatgcaacaagggaggaagaacaatagaatggttc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atttggatgttgaatgaccttgaaatatgcaacaagggaggaagaacaatagaatggttc 397
Query: 768 agaagttgcgcgtggtgggtatactatcgcgactattttcccattaaactcgtcaaaacc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agaagttgcgcgtggtgggtatactatcgcgactattttcccattaaactcgtcaaaacc 457
Query: 828 acagatttggatccttcgagaaactatctatttgcctgcttcccacatggtgttgtctgt 887
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 458 acagatttggatccttcgagaaactatctatttgcctgcttcccacacggtgttgtctgt 517
Query: 888 tccggagctttcggtgcttttgccactaatgctctagaattctataaagtatttcctgga 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tccggagctttcggtgcttttgccactaatgctctagaattctataaagtatttcctgga 577
Query: 948 atgacttgcaatatgatcacactcggaggacattttcgtgtaccgttctttagagattta 1007
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 578 atgacttgcaatatgatcacactcggaggacatttccgtgtaccgttctttagagattta 637
Query: 1008 gtgctggcgttaggttgctgtgcatcttcacaagaaagtttactatatcttttggataaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gtgctggcgttaggttgctgtgcatcttcacaagaaagtttactatatcttttggataaa 697
Query: 1068 aagaactataaagggaaatgcgttgctttg 1097
||||||||||||||||||||||||||||||
Sbjct: 698 aagaactataaagggaaatgcgttgctttg 727
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,690
Number of extensions: 6160
Number of successful extensions: 6160
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6160
Number of HSP's successfully gapped: 1
Length of query: 2056
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2039
Effective length of database: 8,119,229
Effective search space: 16555107931
Effective search space used: 16555107931
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)