BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19132 (UTR included)
(2242 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1731_C1 1550 0.0
>BF14_1731_C1
Length = 906
Score = 1550 bits (782), Expect = 0.0
Identities = 803/810 (99%)
Strand = Plus / Plus
Query: 361 tacttgtacctaaacatcttacatcttcaatatttacaaagcttaaacattgattacctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tacttgtacctaaacatcttacatcttcaatatttacaaagcttaaacattgattacctg 156
Query: 421 tcgtttaaaaaagaatattgttaagtttttcctacatcgcatataataagcatgaaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcgtttaaaaaagaatattgttaagtttttcctacatcgcatataataagcatgaaaatt 216
Query: 481 atttgcttttccaactaagaatggaaaggatttttgtattgttttgtttattgttatata 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atttgctgttccaactaagaatggaaaggatttttgtattgttttgtttattgttatata 276
Query: 541 tcagcgaagtattcacattaccttacgacgttcactggctacatggctctgcaactatag 600
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 277 tcagcgaagtattcacattaccttacaacgttcactggctacatggctctgcaactatag 336
Query: 601 atcgtgatatacaacccttaaagcaaaatgtagatgtgtattgttaccctggttcaccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atcgtgatatacaacccttaaagcaaaatgtagatgtgtattgttaccctggttcaccaa 396
Query: 661 aaaatttaatggcattatggcaaacagcaaagttccatataaagataaaggatgatgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaaatttaatggcattatggcaaacagcaaagttccatataaagataaaggatgatgagt 456
Query: 721 tcagccaatatatcggcaatactcctgagcaagtgtacaatgactataaagaggatagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcagccaatatatcggcaatactcctgagcaagtgtacaatgactataaagaggatagct 516
Query: 781 ttagctggacggttgtgaatccctttctaaaaaaatcctacagaacggtatcactagaca 840
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 517 ttagctggacagttgtgaatccctttctaaaaaaatcctacagaacggtatcacttgaca 576
Query: 841 ttttcacaccaacctgtatggcaattaatactaaacagaagcataccattgaattgcaga 900
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttttcacaccgacctgtatggcaattaatactaaacagaagcataccattgaattgcaga 636
Query: 901 tacaaagaatagatttatggagggttctgatgatggtagttggtataagtgctatatttg 960
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 637 tacaaagaatagatttatggagggttctgatgatggtaattggtataagtgctatatttg 696
Query: 961 catcccgatcactaagtggtaatcctgttttcttttacctatgtggtattattgttggtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 catcccgatcactaagtggtaatcctgttttcttttacctatgtggtattattgttggtg 756
Query: 1021 tatcagcctcttttatgttgcttgtgtactatgtcagcaagctactgccaaaaaaaacct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tatcagcctcttttatgttgcttgtgtactatgtcagcaagctactgccaaaaaaaacct 816
Query: 1081 taacatatggtatattaattggaggttggacggtcggtgtatacatattccaacagatgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 taacatatggtatattaattggaggttggacggtcggtgtatacatattccaacagatgt 876
Query: 1141 gggaaaacgtccgcagtattgttacaacat 1170
|||||||| |||||||||||||||||||||
Sbjct: 877 gggaaaacatccgcagtattgttacaacat 906
Score = 174 bits (88), Expect = 4e-43
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 190 caaggaaccgaaacgtcgagataatccagttctaaaataataaaaaacgcgaagtgaaat 249
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 caaggaaccgaaacgtcgagataatctagttctaaaataataaaaaacgcgaagtgaaat 60
Query: 250 ccgaaaatcgtagttatatttaaaaaacaattatct 285
||||||||||||||||||||||||||| ||||||||
Sbjct: 61 ccgaaaatcgtagttatatttaaaaaaaaattatct 96
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,138
Number of extensions: 5933
Number of successful extensions: 5933
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5933
Number of HSP's successfully gapped: 2
Length of query: 2242
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2225
Effective length of database: 8,119,229
Effective search space: 18065284525
Effective search space used: 18065284525
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)