BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19134 (UTR included)
(1853 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A2E03 1205 0.0
>BF01015A2E03
Length = 673
Score = 1205 bits (608), Expect = 0.0
Identities = 623/628 (99%)
Strand = Plus / Plus
Query: 504 ccggtctcgtcagaaacttataccgttgacatagaggctgtcaaacgagctataggcaga 563
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 46 ccggtctcgtcagaaacttatactgttgacgtagaggctgtcaaacgagctataggcaga 105
Query: 564 aggacatgtatgatagtgggttcagctccgaactacccgtacggcaccatggacgatata 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 aggacatgtatgatagtgggttcagctccgaactacccgtacggcaccatggacgatata 165
Query: 624 aagtcgctgtcagacatagcgctggagtatgacgtgccgttacacgtagacgcctgtctc 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aagtcgctgtcagacatagcgctggagtatgacgtgccgttacacgtagacgcctgtctc 225
Query: 684 ggtgggttcatagcggccttcatgacggaggctgggtacaatgtacccgtgttcgacttc 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ggtgggttcatagcggccttcatgacggaggctgggtacaatgtacccgtgttcgacttc 285
Query: 744 agactgcccggtgttgccagtatatcagctgacacccataagtatggatacgcgcccaag 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agactgcccggtgttgccagtatatcagctgacacccataagtatggatacgcgcccaag 345
Query: 804 ggtacgtcggtgatagtgtaccgtaaggaagaatacagacatcaccagtatacagtgagc 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggtacgtcggtgatagtgtaccgtaaggaagaatacagacatcaccagtatacagtgagc 405
Query: 864 accgagtggccgggaggggtgtacggctcgcccaccgttaatggcagtcgtgcgggcggc 923
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 406 accgagtggccgggaggggtgtacggctcgcccaccgttaatggcagtcgtgctggcggc 465
Query: 924 ctgatagcggcgtgctgggccaccatgatgtacgtcggccgcgaacagtacgtgcggatg 983
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 466 ctgatagcggcgtgctgggccaccatgatgtacgtcggccgcgaccagtacgtgcggatg 525
Query: 984 gcgggcgaggtcgtccacacggccaggaggatagaggacgagatccgtaagattaatgga 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gcgggcgaggtcgtccacacggccaggaggatagaggacgagatccgtaagattaatgga 585
Query: 1044 ttgttcatattcggccagcccgcgaccaccgtggtggcgttcgggtccaacagctttgac 1103
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 586 ttgttcatattcggccagcccgcgaccaccgtggtagcgttcgggtccaacagctttgac 645
Query: 1104 atcttcaaactagcggacctcctgcatc 1131
||||||||||||||||||||||||||||
Sbjct: 646 atcttcaaactagcggacctcctgcatc 673
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,499
Number of extensions: 6981
Number of successful extensions: 6981
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6981
Number of HSP's successfully gapped: 1
Length of query: 1853
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1836
Effective length of database: 8,119,229
Effective search space: 14906904444
Effective search space used: 14906904444
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)