BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19136 (UTR included)
(1258 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 159 1e-38
BF14_619_C1 119 1e-26
BF14_335_C2 70 9e-12
>BF01047B2H03
Length = 758
Score = 159 bits (80), Expect = 1e-38
Identities = 211/252 (83%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 343 tcatacgtgaagcggttagcctttcggtagccagagcgtaaagggaaataaccacaaacg 402
|||||| |||||||||||| ||| ||||| || ||| ||| ||||||||||||||||
Sbjct: 251 tcatacatgaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacg 192
Query: 403 agcgatcagtaggttttgtgagagagagcactagggctataaaaacaaatgtcaagcctt 462
||||| | | |||||||||||||| || |||||||||||| |||| |||||||||
Sbjct: 191 ggcgattaattggttttgtgagagaagacattagggctataaagtcaaacatcaagcctt 132
Query: 463 attccatccttaaagcggctacggattggactataattatggatacgtatgaaaaacaat 522
| || ||||||||||||| | ||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 131 actctatccttaaagcggtttcggattgcactataatcatggatacgtatggggaacgat 72
Query: 523 acaaaatccccaaggatatttgtgcgtcggcttccagatcagacata-tttatgtatttg 581
||||||||||| || ||| ||||| ||||| ||||||| |||||||| ||||| |||| |
Sbjct: 71 acaaaatccccgagcata-ttgtgtgtcggtttccagaccagacatattttatatattcg 13
Query: 582 cgaattttaaag 593
||||||||||||
Sbjct: 12 cgaattttaaag 1
>BF14_619_C1
Length = 793
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 659 gaagatgggattgcatgacgccctccgacggcagaacgccggagcgacgtgtatgaaacg 718
||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 87 gaagatgggattgcatgacgccccccgacggcagaacgccggagcgacgcgtaagaaacg 28
Query: 719 ggacctcgtctt 730
||||||||||||
Sbjct: 27 ggacctcgtctt 16
>BF14_335_C2
Length = 1827
Score = 69.9 bits (35), Expect = 9e-12
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 565 acatatttatgtatttgcgaattttaaagcgcgttgtgatgatagagcttacttttcctt 624
|||||||| |||||| ||||||||||||||||| | | | ||||||| ||| ||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 625 gggaaatcaacatccccaaagaccataccatcaag 659
|| | | ||||||||||||| ||||| ||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaag 1183
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,561
Number of extensions: 1734
Number of successful extensions: 1734
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1731
Number of HSP's successfully gapped: 3
Length of query: 1258
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1241
Effective length of database: 8,119,229
Effective search space: 10075963189
Effective search space used: 10075963189
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)