BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19138 (UTR included)
(1564 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1A09 948 0.0
BF01053B2G04 155 3e-37
>BF01061A1A09
Length = 586
Score = 948 bits (478), Expect = 0.0
Identities = 499/506 (98%)
Strand = Plus / Plus
Query: 3 acttcaagaagaccattccgaagctcttcagatagcactaccgctacaccagctttacct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 acttcaagaagaccattccgaagctcttcagatagcactaccgctacaccagctttacct 138
Query: 63 gaaggcgacccagtgtatatcagccggtaaccctgtccgatgttccgagacttattgccc 122
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gatggcgacccagtgtatatcagccggtaaccctgtccgatgttccgagacttattgccc 198
Query: 123 ttccagcgagtttcctggaggaacgcacactggacccgacgtctcatgagtacatctgcg 182
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 199 ttccagcgagtttcctggaggaacgcacactggacctgacgtctcatgagtacatctgcg 258
Query: 183 agttctctgcatcgtccggttagagagccaatattccacgttgcaaagcggagtttcctt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agttctctgcatcgtccggttagagagccaatattccacgttgcaaagcggagtttcctt 318
Query: 243 tggggtactaacgtctttagccgtgcccgtacttgacacggtagcccttgcccacttatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggggtactaacgtctttagccgtgcccgtacttgacacggtagcccttgcccacttatc 378
Query: 303 gcaggtgtagggcgatgtgcctgcgcgtcgtttatcggcgacgccctagccgtacccagt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcaggtgtagggcgatgtgcctgcgcgtcgtttatcggcgacgccctagccgtacccagt 438
Query: 363 ccataaacttttgcaaccataagagtggcgggagtggttttaacggagcgactgccgtct 422
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 439 ccatagacttttgcaaccataagagtggcgggaatggttttaacggagcgactgccgtct 498
Query: 423 gacctccaaaaccccgttttacgggtaaaaccaggaaaggaaaagatagagaatggggga 482
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 499 gacctccaaaaccccgttttatgggtaaaaccaggaaaggaaaagatagagaagggggga 558
Query: 483 aagaggttaggaaggggaatgagggg 508
||||||||||| ||||||||||||||
Sbjct: 559 aagaggttagggaggggaatgagggg 584
>BF01053B2G04
Length = 526
Score = 155 bits (78), Expect = 3e-37
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 590 gcaagcgacccgctacctccgagatgagttcccagctatcatgtctcactcgggctccgg 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 gcaagcgacccgctacctccgagatgagttcccagctatcatgtctcactcgggttccgg 504
Query: 650 tcgtgtccctcgggctgcgctg 671
||||||||||||||||||||||
Sbjct: 505 tcgtgtccctcgggctgcgctg 526
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,641
Number of extensions: 2268
Number of successful extensions: 2268
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2268
Number of HSP's successfully gapped: 2
Length of query: 1564
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1547
Effective length of database: 8,119,229
Effective search space: 12560447263
Effective search space used: 12560447263
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)