BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19167 (UTR included)
(1597 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2G11 1150 0.0
BF01029A2C10 468 e-131
>BF01020B2G11
Length = 752
Score = 1150 bits (580), Expect = 0.0
Identities = 586/588 (99%)
Strand = Plus / Plus
Query: 470 agctataaattcacatacattaacaaaaatcatggtgagagtatattctttagcgattct 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 165 agctataaattcacatacattaacaaaaatcatggtgagagtatattctttagcgatcct 224
Query: 530 atacaagggggtgaatagtgcgacaactcttaaggcagcatacgacctacaaagttttag 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atacaagggggtgaatagtgcgacaactcttaaggcagcatacgacctacaaagttttag 284
Query: 590 tttcttccaaaggacctccgtccaagagtttatgagttttgtcagcaaaactatggttga 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tttcttccaaaggacctccgtccaagagtttatgagttttgtcagcaaaactatggttga 344
Query: 650 aaggacacagcctgcttctagacagtcagtaaaagaaggtgagtatatggtgcaagtgta 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aaggacacagcctgcttctagacagtcagtaaaagaaggtgagtatatggtgcaagtgta 404
Query: 710 tgtcagagctgacaacttagcaggaatactcatatccgatcatgagtatccaaacagggt 769
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 405 tgtcagagctgacaacttagcaggaatacttatatccgatcatgagtatccaaacagggt 464
Query: 770 tgctcacactttaatcacaaaattacttgatgaattctccgctaaagtgccagttgatac 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgctcacactttaatcacaaaattacttgatgaattctccgctaaagtgccagttgatac 524
Query: 830 atgggctacggcaaatgaaactacagtagattttccagttttaccacaatatttagcaaa 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atgggctacggcaaatgaaactacagtagattttccagttttaccacaatatttagcaaa 584
Query: 890 atatcaaaatccaagggaagctgatgctctgacgaaaatacagaatgatttggatgagac 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atatcaaaatccaagggaagctgatgctctgacgaaaatacagaatgatttggatgagac 644
Query: 950 aaaaatcattcttcatgatacaattaaagccgttttagagagaggagaaaaactggatga 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aaaaatcattcttcatgatacaattaaagccgttttagagagaggagaaaaactggatga 704
Query: 1010 tttagtagctaaatctgacgatctctccatgcacagtaaggcatttta 1057
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tttagtagctaaatctgacgatctctccatgcacagtaaggcatttta 752
Score = 317 bits (160), Expect = 3e-86
Identities = 163/164 (99%)
Strand = Plus / Plus
Query: 229 gcaaaaatttattgactcgaattttggaatgtataaaacataacttaatttcatatttag 288
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaaaactttattgactcgaattttggaatgtataaaacataacttaatttcatatttag 60
Query: 289 tattatatagttagctaactatactgaatttataacattatatacatgttattttattaa 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattatatagttagctaactatactgaatttataacattatatacatgttattttattaa 120
Query: 349 tcctgctgattcgtatttatattatattatccgaaagatttcat 392
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctgctgattcgtatttatattatattatccgaaagatttcat 164
>BF01029A2C10
Length = 740
Score = 468 bits (236), Expect = e-131
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1354 gctttttttatgaacaaaatatacctgtagtagtatttttaaacacatgaaaaatctaca 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctttttttatgaacaaaatatacctgtagtagtatttttaaacacatgaaaaatctaca 60
Query: 1414 taatatatatttacctatatatatggatatatatttatatatatgtgtatataattggta 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatatatatttacctatatatatggatatatatttatatatatgtgtatataattggta 120
Query: 1474 agtatgataaagcaacatattgatttttaaaatatttttttgttagaagtatattatctt 1533
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtatgataaagaaacatattgatttttaaaatatttttttgttagaagtatattatctt 180
Query: 1534 actatgtgctgctagtatttttcttgtcagcaatcattacttggatataagcttttgctt 1593
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attatgtgctgctagtatttttcttgtcagcaatcattacttggatataagcttttgctt 240
Query: 1594 aatg 1597
||||
Sbjct: 241 aatg 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,754
Number of extensions: 7884
Number of successful extensions: 7884
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7884
Number of HSP's successfully gapped: 3
Length of query: 1597
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1580
Effective length of database: 8,119,229
Effective search space: 12828381820
Effective search space used: 12828381820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)