BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19192 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2B05 688 0.0
BF01050A1A06 76 2e-13
>BF01053B2B05
Length = 396
Score = 688 bits (347), Expect = 0.0
Identities = 365/371 (98%)
Strand = Plus / Plus
Query: 738 ggtttcaagacgccgcgtgaggcaattgagggcacatacattgataagaagtgtccattc 797
||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggtttcaagacacccagagaggcaattgagggcacatacattgataagaagtgtccattc 61
Query: 798 actgggaatgtttccatccgaggcagaatcctaactggtgtcgtacagaagatgaaaatg 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 actgggaatgtttccatccgaggcagaatcctaactggtgtcgtacagaagatgaaaatg 121
Query: 858 cagagaaccattgtcatccgacgcgattacctacactacctgccaaaatacaaccgtttt 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cagagaaccattgtcatccgacgcgattacctacactacctgccaaaatacaaccgtttt 181
Query: 918 gagaaacgacacaggaatatgtccgttcatctatcaccctgtttcagggatgttgaactc 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagaaacgacacaggaatatgtccgttcatctatcaccctgtttcagggatgttgaactc 241
Query: 978 ggagacatcgttaccatcggcgagtgccggccgctgtccaagactgtgcgtttcaacgtt 1037
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 242 ggagacatcgttaccatcggcgagtgccgaccgctgtccaagactgtgcgtttcaacgtt 301
Query: 1038 ctcaaggtctccaagggaaaaggctccaaaaagtctttcaaaaaattctaataaacttac 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 302 ctcaaggtctccaagggaaaaggctccaaaaagtctttcaaaaaattctaataaagttac 361
Query: 1098 ttcataagtaa 1108
|||||||||||
Sbjct: 362 ttcataagtaa 372
>BF01050A1A06
Length = 653
Score = 75.8 bits (38), Expect = 2e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1166 gacttccatcaaggattcgttaaacgttta-cgctgagggagagagaaagatacgcaaat 1224
|||| ||| ||||| | |||| |||||||| ||| ||||||||||||||||||| |||||
Sbjct: 484 gactaccaacaaggttgcgttgaacgtttaacgcggagggagagagaaagatacacaaat 543
Query: 1225 gtaggaagtaggagagag 1242
|||| |||||||||||||
Sbjct: 544 gtagaaagtaggagagag 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,571
Number of extensions: 5686
Number of successful extensions: 5686
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5686
Number of HSP's successfully gapped: 2
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)