BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19204 (UTR included)
(2998 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1684_C1 2210 0.0
BF01059B1F09 418 e-116
>BF14_1684_C1
Length = 1135
Score = 2210 bits (1115), Expect = 0.0
Identities = 1130/1135 (99%)
Strand = Plus / Plus
Query: 519 gtgctccaccgagcgaggcggggcttcggtttcgttctgcggggggcgaaggcgtcgtcc 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgctccaccgagcgaggcggggcttcggtttcgttctgcggggggcgaaggcgtcgtcc 60
Query: 579 ccgctcatggagcttcgcccttcggagcgctgtccggcgctgcagtatctagacgacgtg 638
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 ccgctcatggagcttcgcccttcggagcgctgtccagcgctgcagtatctagacgacgtg 120
Query: 639 gacgcgggcggagtcgccgaccgcgcgggccttaagaaaggagacttccttgtggcgatc 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacgcgggcggagtcgccgaccgcgcgggccttaagaaaggagacttccttgtggcgatc 180
Query: 699 aacggcgaggacgtgtccgcggcgtcccacgagcacgtggtggacctcatccggggctcg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacggcgaggacgtgtccgcggcgtcccacgagcacgtggtggacctcatccggggctcg 240
Query: 759 ggggcgctggtcgctatgacggtcgtctcgctcaccccgtgccctatcaacgacaacaac 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggggcgctggtcgctatgacggtcgtctcgctcaccccgtgccctatcaacgacaacaac 300
Query: 819 ccgggcggagtgcccgccagcaagtcgcagaaccaactggcgagctccggccggccctac 878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgggcggagtgcccgccagcaagtcgcagaaccaactggcgagctccggccggccctac 360
Query: 879 gctgccaccctgcccaggaaggcggctggaggtcgaagccccgcgccggcccctcctcgg 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgccaccctgcccaggaaggcggctggaggtcgaagccccgcgccggcccctcctcgg 420
Query: 939 cgtgatccacggactaccctcagcgtgggacgagcccgggccaaatccatggtggcggga 998
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgggatccacggactaccctcagcgtgggacgagcccgggccaaatccatggtggcggga 480
Query: 999 ttggaaaacggcggcgagaaagaggagagtgtggaaccattaagtgtcgcggggaaatct 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttggaaaacggcggcgagaaagaggagagtgtggaaccattaagtgtcgcggggaaatct 540
Query: 1059 tcgtcggccgagtcggtccagttacacggaagcaacacggccacgcccgtgtccggaact 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgtcggccgagtcggtccagttacacggaagcaacacggccacgcccgtgtccggaact 600
Query: 1119 cccgtggcgccgaggacggcgtccatacgagcccgccctgtgtcaggaaggatcacggcc 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccgtggcgccgaggacggcgtccatacgagcccgccctgtgtcaggaaggatcacggcc 660
Query: 1179 gccgagctggaggagctgttccagagacaggcggacgacgagcatgtcaacagtggcccg 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gccgagctggaggagctgttccagagacaggcggacgacgagcatgtcaacagtggcccg 720
Query: 1239 gccatgatgactcgctcggccttccaagacggcggctgttcccctccaccgtcccccgcg 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gccatgatgactcgctcggccttccaagacggcggctgttcccctccaccgtcccccgcg 780
Query: 1299 aggccggccagggtgtacgcctctgtcgccgacatgaagaggaacagaaccaagctgtac 1358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 781 aggccggccagggtgtacgcctccgtcgccgacatgaagaggaacagaaccaagctgtac 840
Query: 1359 cgtgagccggcgtccctccggcgcgagttccactcgacccccgacctggccgcggagccc 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgtgagccggcgtccctccggcgcgagttccactcgacccccgacctggccgcggagccc 900
Query: 1419 gacgcccgcccgctccgcaccaggtccagcgaggacgtacatgagtcacttcgcggccct 1478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 901 gacgcccgcccgctccgcaccaggtccagcgaggacgtacatgagtcactccgcggccct 960
Query: 1479 cccccgtccgaggctccccctcctccgccggggctgcccgcgtcttcgttccgtccctcg 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cccccgtccgaggctccccctcctccgccggggctgcccgcgtcttcgttccgtccctcg 1020
Query: 1539 tcggccgccaagctgtacgcctcgccccgggacctcgcggccgtcgcttacagaccgacc 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcggccgccaagctgtacgcctcgccccgggacctcgcggccgtcgcttacagaccgacc 1080
Query: 1599 gcggacacgggtcgtaaggcggcgggtccgcgcgcctggtcccgcggcgcccgcg 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 acggacacgggtcgtaaggcggcgggtccgcgcgcctggtcccgcggcgcccgcg 1135
>BF01059B1F09
Length = 230
Score = 418 bits (211), Expect = e-116
Identities = 217/219 (99%)
Strand = Plus / Plus
Query: 1957 cgggcgcggagcgggagcgagacgacggcgacaactcgtcgtccggcgtgtcgtccgacc 2016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cgggcgcggagcgggagcgagacgacggcgacaactcgtcgtccggcgtgtcgtccgacc 71
Query: 2017 aggaggccgcgcggcctccgcggcgggacaaggtctcgttctgcagctcggtgaccgtga 2076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aggaggccgcgcggcctccgcggcgggacaaggtctcgttctgcagctcggtgaccgtga 131
Query: 2077 agtcctccaatgacgtcattagcaccgagcccgtgcacagctcgtccgagagcctcgcgc 2136
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agtcctccaacgacgtcattagcaccgagcccgtgcacagctcgtccgagagcctcgcgc 191
Query: 2137 cgccgcccatgaggaggcacaattcgctgacccgcaagc 2175
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 192 cgccgcccatgaggaggcacaactcgctgacccgcaagc 230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 258,357
Number of extensions: 5932
Number of successful extensions: 5932
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5932
Number of HSP's successfully gapped: 2
Length of query: 2998
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2980
Effective length of database: 8,109,745
Effective search space: 24167040100
Effective search space used: 24167040100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)