BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19207 (UTR included)
(7177 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3279_C1 1963 0.0
BF01034A1D08 1546 0.0
>BF14_3279_C1
Length = 1010
Score = 1963 bits (990), Expect = 0.0
Identities = 1005/1010 (99%)
Strand = Plus / Plus
Query: 4976 ggagaatgaacaaggccccgacggtaaaaagaagggtcagaagaaagcgaagaagtcgaa 5035
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagaatgaacatggccccgacggtaaaaagaagggtcagaagaaagcgaagaagtcgaa 60
Query: 5036 caagtccaaggcggcccaaagaaagaacagtaaaaagcagagtgaccaacagcaggggag 5095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagtccaaggcggcccaaagaaagaacagtaaaaagcagagtgaccaacagcaggggag 120
Query: 5096 cgatctcagtgcaaagatatttgccaccatggagaagcacaaggaagtgttcttcgttat 5155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgatctcagtgcaaagatatttgccaccatggagaagcacaaggaagtgttcttcgttat 180
Query: 5156 taggttacattccgcacagtccgccgctagtttagctcctatcggagacccggaccctct 5215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taggttacattccgcacagtccgccgctagtttagctcctatcggagacccggaccctct 240
Query: 5216 aataaactgcgacctcatggacggacgggacgccttcctgacgatggctcgtgaccgtca 5275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aataaactgcgacctcatggacggacgggacgccttcctgacgatggctcgtgaccgtca 300
Query: 5276 ctatgagttctcgtccacgcgccgcgctcgcttctctactctgtgcatgttatacgaact 5335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctatgagttctcgtccacgcgccgcgctcgcttctctactctgtgcatgttatacgaact 360
Query: 5336 acacaaccagggcaccgacaagttcgtgtacacctgcaacagctgcaaatcgcacgtcga 5395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacaaccagggcaccgacaagttcgtgtacacctgcaacagctgcaaatcgcacgtcga 420
Query: 5396 gacacgctaccactgcaccgtgtgcgacgatttcgacctgtgcgttccctgctacgacaa 5455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacgctaccactgcaccgtgtgcgacgatttcgacctgtgcgttccctgctacgacaa 480
Query: 5456 ggagggccatccgcacaagatggagaagctcggcctcgacctggacgtgggctcctcgcc 5515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggagggccatccgcacaagatggagaagctcggcctcgacctggacgtgggctcctcgcc 540
Query: 5516 cggagatctcaagcaggcgaacccgcaggaggctcgcaaactgtccatccaacgttgcat 5575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggagatctcaagcaggcgaacccgcaggaggctcgcaaactgtccatccaacgttgcat 600
Query: 5576 ccagtcgctggtacacgcctgccagtgccgcgacgccaactgccgcctgccgtcgtgcca 5635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccagtcgctggtacacgcctgccagtgccgcgacgccaactgccgcctgccgtcgtgcca 660
Query: 5636 gaagatgaagcgtgtcgtgcagcacacgaagatctgcaagcgcaagacgaagggcgactg 5695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaagatgaagcgtgtcgtgcagcacacgaagatctgcaagcgcaagacgaagggcgactg 720
Query: 5696 cccgatatgcaagcagctcatcgctttgtgctgttaccacgccaaacactgcacggagac 5755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cccgatatgcaagcagctcatcgctttgtgctgttaccacgccaaacactgcacggagac 780
Query: 5756 caagtgctcggttccgttctgcagcagcataaagcagaagttgaagcaacagcaagtaca 5815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caagtgctcggttccgttctgcagcagcataaagcagaagttgaagcaacagcaagtaca 840
Query: 5816 gcagcgcgttcagcagcaacagttgctgaggaggcgagtggccgccatgaacactcgggg 5875
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 841 gcagcgcgttcagcagcaacagttgctgagaaggcgagtggccgccatgaacactcgggg 900
Query: 5876 atgtgcggccggagcacccagtccgcctccgcagcccgcgctcgggtctccgccacccgc 5935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 atgtgcggccggagcacccagtccgcctccgcagcccgcgctcgggtctccgccacccgc 960
Query: 5936 caagcctgccgcacacgcattaccgcacaacgtgcagaaggcattgcagc 5985
|||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 961 caagcccgccgcacacgcgttgccgcacaacgtgcagaaggcattgcagc 1010
>BF01034A1D08
Length = 780
Score = 1546 bits (780), Expect = 0.0
Identities = 780/780 (100%)
Strand = Plus / Plus
Query: 3 ttttgcgctggagagactgagaagtatttcggaatttgtcgtgtaaattttctgtttttt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgcgctggagagactgagaagtatttcggaatttgtcgtgtaaattttctgtttttt 60
Query: 63 cttacatcatttaatcataaactgtaccattccgtatattttaaagtgttaagtgaaatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttacatcatttaatcataaactgtaccattccgtatattttaaagtgttaagtgaaatc 120
Query: 123 gtgtagttcgctcggtaaaataagttccataaagtagttaaaatctggtgatattgtttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgtagttcgctcggtaaaataagttccataaagtagttaaaatctggtgatattgtttt 180
Query: 183 catttattgtgctagttccgtcggaagatggtgagagggtctgtgtagctcttcgattcg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catttattgtgctagttccgtcggaagatggtgagagggtctgtgtagctcttcgattcg 240
Query: 243 gagctttgtaatggcgaatacttgagtgagaaattttaatatgtgccttcaatggttcga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagctttgtaatggcgaatacttgagtgagaaattttaatatgtgccttcaatggttcga 300
Query: 303 aggacatcgaacgatcgggatgtgggtgaattacgttgtgatggatgacaaatcgctcta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggacatcgaacgatcgggatgtgggtgaattacgttgtgatggatgacaaatcgctcta 360
Query: 363 aaatgttatttcttaaagatataagacatataagtgttatttgaatcggcgggccgaaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatgttatttcttaaagatataagacatataagtgttatttgaatcggcgggccgaaat 420
Query: 423 attcacgacggcttacgtttagtaaacagagccatggccgatcatcatgtggatgagccg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attcacgacggcttacgtttagtaaacagagccatggccgatcatcatgtggatgagccg 480
Query: 483 cctaacaagcgggctaaaatgatccgggaccctttccagggtccgtcggacaccgcagat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctaacaagcgggctaaaatgatccgggaccctttccagggtccgtcggacaccgcagat 540
Query: 543 gggttctcaaaccttgacatgtttgatctcgagaaggacctccctgatgagttgatggga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggttctcaaaccttgacatgtttgatctcgagaaggacctccctgatgagttgatggga 600
Query: 603 ggctcttggggtgaacaacccggtgtcacggggccaaagcccccagctcagggccctggt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggctcttggggtgaacaacccggtgtcacggggccaaagcccccagctcagggccctggt 660
Query: 663 ccggggcaaatggtgcagcagctcaatggagatgatccaacagctgctatgcaaagacaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggggcaaatggtgcagcagctcaatggagatgatccaacagctgctatgcaaagacaa 720
Query: 723 attaataatcatcttatacaacaaggcaacaaaggtggattagtaggccacaacaacccc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attaataatcatcttatacaacaaggcaacaaaggtggattagtaggccacaacaacccc 780
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 78,490
Number of extensions: 9119
Number of successful extensions: 9119
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9119
Number of HSP's successfully gapped: 2
Length of query: 7177
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7159
Effective length of database: 8,109,745
Effective search space: 58057664455
Effective search space used: 58057664455
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)