BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19209 (UTR included)
(2119 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2B10 1661 0.0
BF01029A1E05 1066 0.0
BF14_222_C1 731 0.0
>BF01033B2B10
Length = 880
Score = 1661 bits (838), Expect = 0.0
Identities = 862/870 (99%)
Strand = Plus / Plus
Query: 1210 aagtctggttactgtcttattacaacaacgcatattccataatactctttatacctctga 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aagtctggttactgtcttattacaacaacgcatattccataatactctttatacctctga 70
Query: 1270 tgattataaatggagaactaagtgtgctttggaactatacaaacttccacagttcatatt 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgattataaatggagaactaagtgtgctttggaactatacaaacttccacagttcatatt 130
Query: 1330 tttggatgcaaatgctcgttggtggtttatgcggtttcgctatcggatatgttacatctt 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tttggatgcaaatgctcgttggtggtttatgcggtttcgctatcggatatgttacatctt 190
Query: 1390 tgcaaatcaaagtcacttcacctttaacacataatatatcaggcacagcgaaggcttgtg 1449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgcaaatcaaagtcacttcacctttaacacataatatatcaggcacagcgaaggcttgtg 250
Query: 1450 ctcagactgttatagctacacagtggtacaatgaatccaagaacggcctgtggtggacgt 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctcagactgttatagctacacagtggtacaatgaatccaagaacggcctgtggtggacgt 310
Query: 1510 caaatgttatagttctggctagcagcgctttgtatgccagattcaagcaagttgagatgg 1569
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 311 caaatgttatagttctggctagtagtgctttgtatgccagattcaagcaagttgagatgg 370
Query: 1570 aagaacattctagaaaggtaattccagaagaagagaaaagcttagtgtaattattttagt 1629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagaacattctagaaaggtaattccagaagaagagaaaagcttagtgtaattattttagt 430
Query: 1630 tgtccatagaattgtgtagctcaaatcattgttcagtttatattaatttataatttgtta 1689
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tgtccatagagttgtgtagctcaaatcattgttcagtttatattaatttataatttgtta 490
Query: 1690 agtctattccaaataaaatttatgtgattttattttatatttaagttataaaatgtagta 1749
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 491 agtctattccaaataaaatttatgtgattttattttatatttaagttatagaatttagta 550
Query: 1750 tgtaagacatattcgcaaataagtattaatttgggtgcaatttcaatgtaataggtgttt 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tgtaagacatattcgcaaataagtattaatttgggtgcaatttcaatgtaataggtgttt 610
Query: 1810 taaaaagacttcagcatttactaaactagtaatttatatataataggtaggactagaatg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 611 taaaaagacttcagcatttactaaactagtaatttatatataataggtaggtctagaatg 670
Query: 1870 tagtgtgtactttaaacatacaatcaaatgtgctctgtactttagtaaacaaagttatgt 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tagtgtgtactttaaacatacaatcaaatgtgctctgtactttagtaaacaaagttatgt 730
Query: 1930 ttttatagtacaatacatattaatcaagttttaactctatattaagtattaaataatact 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttttatagtacaatacatattaatcaagttttaactctatattaagtattaaataatact 790
Query: 1990 tttctatgtctaatttattgttgacctcagtaatgctgataattgtttttttatatcctg 2049
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 791 tttctatgtgtaatttattgttgacctcagtaatgctgacaattgtttttttatatcctg 850
Query: 2050 ataatatggtactaggtacagattatttga 2079
||||||||||||||||||||||||||||||
Sbjct: 851 ataatatggtactaggtacagattatttga 880
>BF01029A1E05
Length = 731
Score = 1066 bits (538), Expect = 0.0
Identities = 560/567 (98%), Gaps = 1/567 (0%)
Strand = Plus / Plus
Query: 680 ggtcgtatcaatagccacagtatttgttaacaaaagtttgttaagcagccaggcagtcgc 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggtcgtatcaatagccacagtatttgttaacaaaagtttgttaagcagccaggcagtcgc 224
Query: 740 acttgaggcgcctctgttcattacttggttccagtgcattgtctcatttacaatatgctt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acttgaggcgcctctgttcattacttggttccagtgcattgtctcatttacaatatgctt 284
Query: 800 cacattcagcaaaacgggaggaattcctggagtattcaattttcccaagggaactccttg 859
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 285 cacattcagcaaaacgggaggaattcctagagtattcaattttcccaagggaactccttg 344
Query: 860 gagtaaggagattgtaggaaaggtgattccactttctatcatgttcactctaatgatagc 919
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 345 gagtaaggagattgtaggaaagatgattccactttctatcatgttcactctaatgatagc 404
Query: 920 caccaataacctttgcctaaaatatgttggtgtaccattttactacgtcggaagatcctt 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 caccaataacctttgcctaaaatatgttggtgtaccattttactacgtcggaagatcctt 464
Query: 980 gacgacggtcttcaatgttatattcagttatatcttgttgcgacagaccacatcgcttag 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gacgacggtcttcaatgttatattcagttatatcttgttgcgacagaccacatcgcttag 524
Query: 1040 gtgtgttttgtgttgtggctttatcatattcggcttctatctaggagtcgatcaagagag 1099
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gtgtgttctgtgttgtggctttatcatattcggcttctatctaggagtcgatcaagagag 584
Query: 1100 tctactaggttccttttcattaattggaactatatatggagtcattgggtcacttatgct 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tctactaggttccttttcattaattggaactatatatggagtcattgggtcacttatgct 644
Query: 1160 gtctctctattctatttacacaaagaaagtgttgccaagtgttaaccaagaagtctggtt 1219
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtctctctattctatttacannnagaaagtgttgccaagtgttaaccaagaagtctggtt 704
Query: 1220 actgtctta-ttacaacaacgcatatt 1245
||||||||| |||||||||||||||||
Sbjct: 705 actgtcttatttacaacaacgcatatt 731
>BF14_222_C1
Length = 889
Score = 731 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Plus
Query: 301 aaacgaatatgtcagataaaaaactttttaaacgcgatgaaattatcaatcgcaattcta 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 aaacgaatatgtcagataaaaaactttttaaacgccatgaaattatcaatcgcaattcta 60
Query: 361 aaacggatgcagtgtttatcataaaaaatcaagtgtacgatgtaacaaaattcttggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaacggatgcagtgtttatcataaaaaatcaagtgtacgatgtaacaaaattcttggatg 120
Query: 421 atcatcctgggggccatgaggtactgttgaatgttgcgggcaaggacgccagtgaggact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcatcctgggggccatgaggtactgttgaatgttgcgggcaaggacgccagtgaggact 180
Query: 481 tcgacgacatcggtcacagtatggacgctaaggaattgatgaagaagtatttaataggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgacgacatcggtcacagtatggacgctaaggaattgatgaagaagtatttaataggcg 240
Query: 541 atttggttgaagaggacagagtggagcctaaaaaacgaaagtttgattgggacaatccta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atttggttgaagaggacagagtggagcctaaaaaacgaaagtttgattgggacaatccta 300
Query: 601 agactgaaaatgtagcagaaacaagcttcaccagctcttggaagttccccatcgttttgg 660
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agactgaaaatgcagcagaaacaagcttcaccagctcttggaagttccccatcgttttgg 360
Query: 661 ggctgataatgactgtc 677
|||||||||||||||||
Sbjct: 361 ggctgataatgactgtc 377
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,029
Number of extensions: 4984
Number of successful extensions: 4984
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4983
Number of HSP's successfully gapped: 3
Length of query: 2119
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2102
Effective length of database: 8,119,229
Effective search space: 17066619358
Effective search space used: 17066619358
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)