BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19210 (UTR included)
(5515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A2F02 1475 0.0
>BF01038A2F02
Length = 789
Score = 1475 bits (744), Expect = 0.0
Identities = 777/789 (98%)
Strand = Plus / Plus
Query: 3940 acgaacaagattttgatattccaaacattagtaagaaaaataataaaatgaatgaaatat 3999
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 acgaacaagattttgatattccaaacattagtaagaaaaataataaaattaatgaaatat 60
Query: 4000 tgactacagaatctaaaacacagccgatttctttgtctactacaaaggatatagatagta 4059
| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 61 taactacagaatctaaaacacagccaatttctttgtctactacaaaagatatagatagta 120
Query: 4060 aacagaaagaattattaaatgttgatgctaaaactggtaacgaacctaaggctggcaaat 4119
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 aacagaaagaattattaaacgttgatgctaaaattggtaacgaacctaaggctggcaaat 180
Query: 4120 cactatcgaccaaagaatcaccaaaattaacaaagcgcaagtccccgtcaccgaaagttg 4179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 cactatcgaccaaagaatcaccaaaattaacaaagcgcaagtccccgtcaccaaaagttg 240
Query: 4180 atagaaaagaagaaaacaaagctgacgataaagaagtttatgtcattgaaacaacagacg 4239
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atagaaaagaagaaaacaaaactgacgataaagaagtttatgtcattgaaacaacagacg 300
Query: 4240 acgactttcccgaaatacaaataacgaaggggaataaatcgaataagaggtcttttcaac 4299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgactttcccgaaatacaaataacgaaggggaataaatcgaataagaggtcttttcaac 360
Query: 4300 tttatgagaagaagaaagaagaagcagcgaaaccggctaaatcttggagttccgtagctg 4359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttatgagaagaagaaagaagaagcagcgaaaccggctaaatcttggagttccgtagctg 420
Query: 4360 cttctaaaaataaaaaggtcgacgaagtcaaagttgttacggaaaatattgaagaacaag 4419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctaaaaataaaaaggtcgacgaagtcaaagttgttacggaaaatattgaagaacaag 480
Query: 4420 aaacggaagacgaggaaatgaaatcaccagtatcgcttcaagaaaagttatttgaattgt 4479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaacggaagacgaggaaatgaaatcaccagtatcgcttcaagaaaagttatttgaattgt 540
Query: 4480 gcaaaagaagagacataatggtagctgagtgcgatgctccatcagaacttaattttgtcg 4539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcaaaagaagagacataatggtagctgagtgcgatgctccatcagaacttaattttgtcg 600
Query: 4540 aggaacatcatgctgtggtagacctccctcctttagagcaactagatttcggtctagaca 4599
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 601 aggaacatcatgctgtggtagacctccctcctttggagcaactagatttcggtctagaca 660
Query: 4600 acttctcactggaggtcatgcgggacagtcttctggaagtcaacgagccgaaggtctcca 4659
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 acttctcactggaggtcatgcgggacagtcttctggaagtcaacgagccgannntctcca 720
Query: 4660 gtccgatttgcaaaatcaacatcgatgaaatcctgtcttccatcaaagaaacgacatcga 4719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtccgatttgcaaaatcaacatcgatgaaatcctgtcttccatcaaagaaacgacatcga 780
Query: 4720 aagcgatcg 4728
|||||||||
Sbjct: 781 aagcgatcg 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 625,065
Number of extensions: 18126
Number of successful extensions: 18126
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18126
Number of HSP's successfully gapped: 1
Length of query: 5515
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5497
Effective length of database: 8,109,745
Effective search space: 44579268265
Effective search space used: 44579268265
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)