BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19214 (UTR included)
(2506 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2B10 1088 0.0
>BF01033B2B10
Length = 880
Score = 1088 bits (549), Expect = 0.0
Identities = 573/581 (98%)
Strand = Plus / Minus
Query: 1926 tcaaataatctgtacctagtaccatattatcaggatataaaaaaacaattatcagcatta 1985
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 880 tcaaataatctgtacctagtaccatattatcaggatataaaaaaacaattgtcagcatta 821
Query: 1986 ctgaggtcaacaataaattagacatagaaaagtattatttaatacttaatatagagttaa 2045
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ctgaggtcaacaataaattacacatagaaaagtattatttaatacttaatatagagttaa 761
Query: 2046 aacttgattaatatgtattgtactataaaaacataactttgtttactaaagtacagagca 2105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aacttgattaatatgtattgtactataaaaacataactttgtttactaaagtacagagca 701
Query: 2106 catttgattgtatgtttaaagtacacactacattctagtcctacctattatatataaatt 2165
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 700 catttgattgtatgtttaaagtacacactacattctagacctacctattatatataaatt 641
Query: 2166 actagtttagtaaatgctgaagtctttttaaaacacctattacattgaaattgcacccaa 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 actagtttagtaaatgctgaagtctttttaaaacacctattacattgaaattgcacccaa 581
Query: 2226 attaatacttatttgcgaatatgtcttacatactacattttataacttaaatataaaata 2285
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 580 attaatacttatttgcgaatatgtcttacatactaaattctataacttaaatataaaata 521
Query: 2286 aaatcacataaattttatttggaatagacttaacaaattataaattaatataaactgaac 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaatcacataaattttatttggaatagacttaacaaattataaattaatataaactgaac 461
Query: 2346 aatgatttgagctacacaattctatggacaactaaaataattacactaagcttttctctt 2405
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aatgatttgagctacacaactctatggacaactaaaataattacactaagcttttctctt 401
Query: 2406 cttctggaattacctttctagaatgttcttccatctcaacttgcttgaatctggcataca 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cttctggaattacctttctagaatgttcttccatctcaacttgcttgaatctggcataca 341
Query: 2466 aagcgctgctagccagaactataacatttgacgtccaccac 2506
|||| || |||||||||||||||||||||||||||||||||
Sbjct: 340 aagcactactagccagaactataacatttgacgtccaccac 300
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 385,192
Number of extensions: 9327
Number of successful extensions: 9327
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9327
Number of HSP's successfully gapped: 1
Length of query: 2506
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2489
Effective length of database: 8,119,229
Effective search space: 20208760981
Effective search space used: 20208760981
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)