BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19231 (UTR included)
(1792 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2311_C1 1770 0.0
>BF14_2311_C1
Length = 2122
Score = 1770 bits (893), Expect = 0.0
Identities = 909/913 (99%), Gaps = 1/913 (0%)
Strand = Plus / Plus
Query: 880 cgcgtgtattgtccaagccttcggaaggtgctccagatatacgccccgaggagccccagc 939
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 286 cgcgtgtattgtccaagccttcggaaggtgctccagatatacgccccgaggagccccaac 345
Query: 940 gacctgatcaaaccgacatcagcatatctggtgaagatatcaacccgaatattgaccaag 999
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gacccgatcaaaccgacatcagcatatctggtgaagatatcaacccgaatattgaccaag 405
Query: 1000 atcaatctagttcgaacgtggagccggagtcccgtccttctgacaacagcgtcttcatca 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atcaatctagttcgaacgtggagccggagtcccgtccttctgacaacagcgtcttcatca 465
Query: 1060 tgaacgccaaacctgaagaccgcgccaccagcttcttcgcccaacctggcatactggccg 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgaacgccaaacctgaagaccgcgccaccagcttcttcgcccaacctggcatactggccg 525
Query: 1120 ctgtgatcggaggggcggtagtggggctgttatgcgccatcctagtggtcatgttcatcg 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctgtgatcggaggggcggtagtggggctgttatgcgccatcctagtggtcatgttcatcg 585
Query: 1180 tgtacaggatgcggaagaaggacgagggctcgtacgccctggacgaaccgaagcgaagcc 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgtacaggatgcggaagaaggacgagggctcgtacgccctggacgaaccgaagcgaagcc 645
Query: 1240 cggccgccgcctcttacgggaaaggtcacaacaaccgggagttctacgcgtgagatacgg 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cggccgccgcctcttacgggaaaggtcacaacaaccgggagttctacgcgtgagatacgg 705
Query: 1300 aacaaactctgccacaggtctactgagcaccagctatctcccagcggacgttagatctct 1359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 706 aacaaactctgccacaggtctactgagcaccagctatctaccagcggacgttagatctct 765
Query: 1360 taaccctataatccatgtggctttagttcaatcccatcaacattaatgtactggtatgcg 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 taaccctataatccatgtggctttagttcaatcccatcaacattaatgtactggtatgcg 825
Query: 1420 tacatatccaccatcgatgttgttcgatgcgatattgtaaactatatcaatttcaagacc 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tacatatccaccatcgatgttgttcgatgcgatattgtaaactatatcaatttcaagacc 885
Query: 1480 aattttatagacgtcagtgaagtgaggtttatggaatagtgtcttaggtcttggactttc 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 aattttatagacgtcagtgaagtgaggtttatggaatagtgtcttaggtcttggactttc 945
Query: 1540 tcaataccgagacatattttttgtgttctgtcaatcagctgtagttgaatcttaatgtga 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 tcaataccgagacatattttttgtgttctgtcaatcagctgtagttgaatcttaatgtga 1005
Query: 1600 gatcttgttttttttaatgttcgtgtaaaaaataataaatgtgccatccgcttccttcaa 1659
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 gatcttg-tttttttaatgttcgtgtaaaaaataataaatgtgccatccgcttccttcaa 1064
Query: 1660 ttgtatatttgccaatcactttagttgtatactttatcatagattatatatcctgtaact 1719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 ttgtatatttgccaatcactttagttgtatactttatcatagattatatatcctgtaact 1124
Query: 1720 gatagtctatggccacgtccatatcttgtctatgtgtataaaattaatgttatatgtatt 1779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 gatagtctatggccacgtccatatcttgtctatgtgtataaaattaatgttatatgtatt 1184
Query: 1780 tgtctacggaacc 1792
|||||||||||||
Sbjct: 1185 tgtctacggaacc 1197
Score = 339 bits (171), Expect = 9e-93
Identities = 174/175 (99%)
Strand = Plus / Plus
Query: 561 gagacgactagtgttcctgtgaccgaagggaccatccagcagcgggacgagccgctcgct 620
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 gagacgactagtgttccagtgaccgaagggaccatccagcagcgggacgagccgctcgct 170
Query: 621 tcggacaaggatctcttcatcgacgatgacggctcgggcctagagatagacgagagctcc 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tcggacaaggatctcttcatcgacgatgacggctcgggcctagagatagacgagagctcc 230
Query: 681 ggctccggctgggggcccggccccggacccgacgacgaagacggccgcggctcag 735
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggctccggctgggggcccggccccggacccgacgacgaagacggccgcggctcag 285
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,836
Number of extensions: 5065
Number of successful extensions: 5065
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5064
Number of HSP's successfully gapped: 2
Length of query: 1792
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1775
Effective length of database: 8,119,229
Effective search space: 14411631475
Effective search space used: 14411631475
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)