BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19247 (UTR included)
(2287 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B2A06 963 0.0
BF01014A1H02 96 3e-19
BF01025A1D01 80 2e-14
BF01024A1H07 80 2e-14
BF14_729_C2 78 7e-14
BF01011A1H06 76 3e-13
BF14_729_C3 76 3e-13
BF01017A2H11 74 1e-12
BF01035X1C09 72 4e-12
>BF01044B2A06
Length = 857
Score = 963 bits (486), Expect = 0.0
Identities = 547/566 (96%), Gaps = 1/566 (0%)
Strand = Plus / Plus
Query: 1722 gctaaacgtggtaagttcactttccctatagatgtatgcttgtttctacaccagttgttg 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gctaaacgtggtaagttcactttccctatagatgtatgcttgtttctacaccagttgttg 136
Query: 1782 agttaatacttgatcctttttacattaagttgccagttgttctgtagatattccattcac 1841
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 137 agttaatacttcatcctttttacattaagttgccagttgttatgtagatattccattcac 196
Query: 1842 ttttatttgttggcagttttgtagatataactacattgtaatataatggcgtttctaggg 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttttatttgttggcagttttgtagatataactacattgtaatataatggcgtttctaggg 256
Query: 1902 ttggcacaatccatatccattattataagaaagttcatgtgtcacccctaacaactactg 1961
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 257 ttggcacaatccatttccattattataagaaagttcatgtgtcaaccctaacaactactg 316
Query: 1962 caatattgcataaacgttgctgcatacgctagtattaaaatcctcgatttcttttaacag 2021
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 317 caatattgcataaacgttgctgcatacgctagtattaaaatcctcgatttttcttatcag 376
Query: 2022 gtttgtatttttttataatgcgattatttaagtcatttaattaatatgcctgttgataaa 2081
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 377 gtttgtattttttaataatgcgattatttaagtcatttaattaatatgcctgttaataaa 436
Query: 2082 tatattatatgtgggattaatctgtttgataaaactttgatttacggatgtacttacata 2141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tatattatatgtgggattaatctgtttgataaaactttgatttacggatgtacttacata 496
Query: 2142 aatttattattttatttttcatttttctcgacctgtcgatttattttacagcaatcctga 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 497 aatttattattttatttttcatttttctcgacctgtcgatttattttacagcagtcgtga 556
Query: 2202 cgatatgacaaatagtgagagaattgacagacgctttcatctcgtctgcccgtgatcact 2261
|||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 557 cgatatgaaaaacagtgagagaattgacggacgctttcatctcgtctgcccgtgatc-gt 615
Query: 2262 gttgctgtaaagtaaccgaaacgtcg 2287
||||||||| ||||| ||| ||||||
Sbjct: 616 gttgctgtacagtaaacgacacgtcg 641
>BF01014A1H02
Length = 787
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 2228 acagacgctttcatctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtcg 2287
||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct: 241 acagacgctttcatctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcg 300
>BF01025A1D01
Length = 764
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 2240 atctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtcg 2287
||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcg 438
>BF01024A1H07
Length = 726
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 2239 catctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtc 2286
|||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 645 catctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtc 692
>BF14_729_C2
Length = 1289
Score = 77.8 bits (39), Expect = 7e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 2241 tctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtcg 2287
|||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcg 574
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 3e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 2226 tgacagacgctttcatctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgt 2285
|||||||| || |||||||||||||||||||||| ||| ||| ||||||||||||||||
Sbjct: 445 tgacagacactcacatctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgt 504
Query: 2286 cg 2287
||
Sbjct: 505 cg 506
>BF14_729_C3
Length = 2041
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 2242 ctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtcg 2287
||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1589 ctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcg 1634
>BF01017A2H11
Length = 713
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 2239 catctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgtcg 2287
|||||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 31 catctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcg 79
>BF01035X1C09
Length = 778
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 2238 tcatctcgtctgcccgtgatcactgttgctgtaaagtaaccgaaacgt 2285
||||||||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 667 tcatctcgtcttcccgtgatcacggttgctgcaaagtaaccgaaacgt 620
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,717
Number of extensions: 6296
Number of successful extensions: 6296
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6296
Number of HSP's successfully gapped: 9
Length of query: 2287
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2270
Effective length of database: 8,119,229
Effective search space: 18430649830
Effective search space used: 18430649830
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)