BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19249 (UTR included)
(3301 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B1B02 1419 0.0
BF01031A2G06 260 1e-68
>BF01053B1B02
Length = 756
Score = 1419 bits (716), Expect = 0.0
Identities = 728/732 (99%)
Strand = Plus / Plus
Query: 2130 gatgcccgggtgatgtcctggtgggactacggttaccagatagctggtatgggcaacagg 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 gatgcccgggtgatgtcctggtgggactacggttaccagatagctggtatgggcaacagg 84
Query: 2190 actaccttagtggacaataatacatggaataattctcacatagcgttggtcgggaaagcc 2249
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 85 actaccttagtggacaataatacatggaataattctcacatagcattggtcgggaaagcc 144
Query: 2250 atggcaagtaatgagacagctgcttatgatatcatgacgatgttggatgtggactatgtg 2309
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcaagcaatgagacagctgcttatgatatcatgacgatgttggatgtggactatgtg 204
Query: 2310 ctggtgatatttggtggtgccatcggttactctggtgatgatatcaataaattcatctgg 2369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctggtgatatttggtggtgccatcggttactctggtgatgatatcaataaattcatctgg 264
Query: 2370 atggtcagaatagctgagggcgaacatcctaaggatatacatgaagcagattacttcaca 2429
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 atggtcagaatagctgagggcgaacatcctaaggatatacatgaagcggattacttcaca 324
Query: 2430 gagagaggagagtacagaatagattcagaggcatcaaaaactatgttaaattcacttatg 2489
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagagaggagagtacagaatagactcagaggcatcaaaaactatgttaaattcacttatg 384
Query: 2490 tacaaattatcatattatcgttacgatagtggtggaagtcccccgggcttcgatcgcact 2549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacaaattatcatattatcgttacgatagtggtggaagtcccccgggcttcgatcgcact 444
Query: 2550 cgcggcgccctgcccggtctgcgtgggttcaaactgacgtacctcgaggaagcttacacc 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cgcggcgccctgcccggtctgcgtgggttcaaactgacgtacctcgaggaagcttacacc 504
Query: 2610 actgagcattggctcgtcagaatatatagagttaagaaaccagacgaattcaaccgacca 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actgagcattggctcgtcagaatatatagagttaagaaaccagacgaattcaaccgacca 564
Query: 2670 cgactacctctggccaagaggacaatacagacctcaaatgtcatgtctaagaaaacgtca 2729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgactacctctggccaagaggacaatacagacctcaaatgtcatgtctaagaaaacgtca 624
Query: 2730 aagagaagaaaaggtgcgttaaagaacaagccaatattagtgaagggcaagaaagtgacc 2789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagagaagaaaaggtgcgttaaagaacaagccaatattagtgaagggcaagaaagtgacc 684
Query: 2790 aagttggattgacgcaaaaaataagactaatctcgttccagggttgccatgccatgcgtc 2849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagttggattgacgcaaaaaataagactaatctcgttccagggttgccatgccatgcgtc 744
Query: 2850 cgccattttaag 2861
||||||||||||
Sbjct: 745 cgccattttaag 756
>BF01031A2G06
Length = 677
Score = 260 bits (131), Expect = 1e-68
Identities = 154/161 (95%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 3142 tatatcacaaacttattgttgcggtgaagtagatcatacaaatacattaaggaaacattg 3201
||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 tatatcacaaaattattgttgcggtgaagtannttatacaaatacattaaggaaacattg 60
Query: 3202 tttgtttgatttctatatatatgattgtggcgaaacaataaaacaagcaaagccgtag-a 3260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct: 61 tttgtttgatttctatatatatgattgtgacgaaacaataaaacaagcaaagccgcagaa 120
Query: 3261 aaatacaggttattttatgttagtttaaaataagacaacga 3301
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatacaggttattttatgttagtttaaaataagacaacga 161
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 376,265
Number of extensions: 7747
Number of successful extensions: 7747
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7746
Number of HSP's successfully gapped: 2
Length of query: 3301
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3283
Effective length of database: 8,109,745
Effective search space: 26624292835
Effective search space used: 26624292835
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)