BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19251 (UTR included)
(2092 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 672 0.0
>BF14_729_C3
Length = 2041
Score = 672 bits (339), Expect = 0.0
Identities = 354/359 (98%)
Strand = Plus / Minus
Query: 1 gtaacaaagatttgccaacggtagctaactggatagggtggtggtgtgagtaaccattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 gtaacaaagatttgccaacggtagctaactggatagggtggtggtgtgagtaaccattga 787
Query: 61 ggtacctgtccgtatgtgtgggtttcctataaacagtatgtcccaaagtattgtcaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggtacctgtccgtatgtgtgggtttcctataaacagtatgtcccaaagtattgtcaggat 727
Query: 121 tcctaacaacaagtatatcaaggaaagctaaagaattatttgcctccaattctatagtac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tcctaacaacaagtatatcaaggaaagctaaagaattatttgcctccaattctatagtaa 667
Query: 181 actgaatcttactattgatagaattgagatggttcagaaaagcagatgttttatttttat 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 actgaatcttattattgatagaattgagatggttcagaaaagcagatgttttatttttat 607
Query: 241 ttaatattgtgaaggtgtcatctacataccgtttataaattaaaggtcttataggaggag 300
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 606 ttaatattgtaaaggtgtcatctacataccgtttaaaaattaaaggtcttataggaggag 547
Query: 301 agcaaagggctcgcacctcgaagtcctccatgaatatgtcagcgacaacgggggaaacc 359
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 546 agcaaagggctcgcacctcgaagtcctccatgaatatttcagcgacaacgggggaaacc 488
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 244 atattgtgaaggtgtcatctacataccgtttataaattaaaggtcttatagg 295
||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 438 atattgtgaaggtgtcaactacataccgtttatatattaaaggtcttatagg 489
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,810
Number of extensions: 14375
Number of successful extensions: 14375
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14375
Number of HSP's successfully gapped: 2
Length of query: 2092
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2075
Effective length of database: 8,119,229
Effective search space: 16847400175
Effective search space used: 16847400175
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)