BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19255 (UTR included)
(2872 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1C01 1207 0.0
BF01007X1D07 971 0.0
>BF01015B1C01
Length = 637
Score = 1207 bits (609), Expect = 0.0
Identities = 627/634 (98%)
Strand = Plus / Plus
Query: 903 gattacgcttatatcatggaaactttcggacccttcgcggccttcatgaggttgtggatt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gattacgcttatatcatggaaactttcggacccttcgcggccttcatgaggttgtggatt 63
Query: 963 gaatgtatgatagttagaccctgctctatggcaatcgtggccttgacgtttagcacgtac 1022
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 64 gaatgtatgatagttagaccctgctctatggcaatcgtggcgttgacgtttagcacatac 123
Query: 1023 gtgttaaagccaattttccctgaatgcagtccccctgaagacgcgacacggttgctggcc 1082
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 124 gtgttaaagccaattttccctgagtgcagtccccctgaagacgcgacacggttgctggcc 183
Query: 1083 gcctgttgtattttattattaacgttcgtcaactgttggtctattcgcgctgcgacacgt 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcctgttgtattttattattaacgttcgtcaactgttggtctattcgcgctgcgacacgt 243
Query: 1143 gttcaggattggtttacttacgccaaactgcttgcactcttcatcatcatagctgcgggt 1202
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gttcaggattggtttacttacgccaaactgcttgcactcttcatcatcatagctgcggga 303
Query: 1203 ttataccaactgagcagagggaaggtggaacacttcacatttgaagggaccacgagtgac 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttataccaactgagcagagggaaggtggaacacttcacatttgaagggaccacgagtgac 363
Query: 1263 gtcacatccatcgccctatctttttattctggattgtttgcttacaatggatggaactat 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gtcacatccatcgccctatctttttattctggattgtttgcttacaatggatggaactat 423
Query: 1323 cttaattttataatcgaggaattaaaggatccagtgcgaaacctccctcgagccatcgcc 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttaattttataatcgaggaattaaaggatccagtgcgaaacctccctcgagccatcgcc 483
Query: 1383 atctcctgcaccctcgtcaccatcgtgtacaccttcaccaacgtagccttctacaccacg 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atctcctgcaccctcgtcaccatcgtgtacaccttcaccaacgtagccttctacaccacg 543
Query: 1443 ttgtcaccaactgaggtgctgggttcggctgctgtagctgtaacattctctgaacgtctc 1502
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 544 ttgtcaccaactgaggtgctgggttcggctgctgtnnntgtaacattctctgaacgtctc 603
Query: 1503 ttcggcgcgttcgctctctctataccaatgttcg 1536
||||||||||||||||||||||||||||||||||
Sbjct: 604 ttcggcgcgttcgctctctctataccaatgttcg 637
>BF01007X1D07
Length = 831
Score = 971 bits (490), Expect = 0.0
Identities = 517/526 (98%)
Strand = Plus / Plus
Query: 1541 tgcgtccactttcggcgctgttaacggcgtgctcttgacttcttcaaggttgttctacgc 1600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgcgtccactttcggtgctgttaacggcgtgctcttgacttcttcaaggttgttctacgc 69
Query: 1601 tggtgctgcccaaggtcaaatgccgggcatgctgacgatggtctcatctcgctccactcc 1660
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 70 tggtgccgcccaaggtcaaatgccgggcatgctgacgatggtctcatcccgttccactcc 129
Query: 1661 cgcaccggctgtgatagctgtggccgtactatctctcatgtatctcacagtgtctgacat 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cgcaccggctgtgatagctgtggccgtactatctctcatgtatctcacagtgtctgacat 189
Query: 1721 tttcgcgctaatcaactacgtcggattcgctacttggctgagcataggagcggcagttct 1780
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 190 tttcgcgctaatcaactacgtcggattcgctacttggctgagtataggagcggcagttct 249
Query: 1781 ctgtctaccggtactgagatacactcaaccgaatttagagaggcccattaaagttaactt 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctgtctaccggtactgagatacactcaaccgaatttagagaggcccattaaagttaactt 309
Query: 1841 gttcttcccagtgatatatataatctgtacgatacttgtcgtcgcgtttcccgcgtgggc 1900
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 310 gttcttcccagtgatatatataatctgtacaatacttgtcgtggcgtttcccgcgtgggc 369
Query: 1901 gtcgcccgcggagacaggggtcggctgtctcatgatattaacggctgttcctgtatacct 1960
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 370 gtcgcccgcggagacaggggtcggctgtctcatgatattgacggctgttcctgtatacct 429
Query: 1961 gttgctgctggaacctaaaacgaggctctctggacttggatttattactgacgccgctac 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gttgctgctggaacctaaaacgaggctctctggacttggatttattactgacgccgctac 489
Query: 2021 ccgtttaatacagaaattgacgttatctgtgcgaccaaagacaaag 2066
||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 490 ccgtttaatacagaaattgacattatctgtgcgaccaaagacaaag 535
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,866
Number of extensions: 6498
Number of successful extensions: 6498
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6498
Number of HSP's successfully gapped: 2
Length of query: 2872
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2855
Effective length of database: 8,119,229
Effective search space: 23180398795
Effective search space used: 23180398795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)