BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19264 (UTR included)
(1763 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B2A06 722 0.0
>BF01005B2A06
Length = 751
Score = 722 bits (364), Expect = 0.0
Identities = 370/372 (99%)
Strand = Plus / Plus
Query: 85 gagttctcaagttggttggtcggggagggcgagtgtgagtggtcagtgctactgtctctg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagttctcaagttggttggtcggggagggcgagtgtgagtggtcagtgctactgtctctg 439
Query: 145 gtcgacaactgcctcaccgacaagcacgatctcacgctagagacgctgaggttttttgag 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcgacaactgcctcaccgacaagcacgatctcacgctagagacgctgaggttttttgag 499
Query: 205 gctattatagaaaagggcacagagcacagtatggagcggctcgtgctgtctcgcgtgtgg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctattatagaaaagggcacagagcacagtatggagcggctcgtgctgtctcgcgtgtgg 559
Query: 265 tcacgtggttactaccactccccacccaacggcgcgctacaggacgagagggacagactc 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcacgtggttactaccactccccacccaacggcgcgctacaggacgagagggacagactc 619
Query: 325 aatgacgtctcgcacgcgagggaaagagagagaaacagggaagcgatgcaacaaatgcag 384
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 aatgacgtctcgcacgcgagggaaagagagaggaacagggaagcgatgcaacaaatgcag 679
Query: 385 cacgaagaaaagatcaacagtcaagtcagcgagctcctgaacgatggtggcacggattgt 444
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cacgaagaaaaaatcaacagtcaagtcagcgagctcctgaacgatggtggcacggattgt 739
Query: 445 gacatacacaga 456
||||||||||||
Sbjct: 740 gacatacacaga 751
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 191,178
Number of extensions: 3618
Number of successful extensions: 3618
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3618
Number of HSP's successfully gapped: 1
Length of query: 1763
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1746
Effective length of database: 8,119,229
Effective search space: 14176173834
Effective search space used: 14176173834
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)