BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19268 (UTR included)
(2593 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2D07 1019 0.0
BF01043A1E06 319 1e-86
BF01040B2H05 252 2e-66
>BF01049B2D07
Length = 757
Score = 1019 bits (514), Expect = 0.0
Identities = 520/522 (99%)
Strand = Plus / Plus
Query: 339 aactaaaattatttactaaagtctaaagtattgtctgtcatttaaatgaaaaccgtacct 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aactaaaattatttactaaagtctaaagtattgtctgtcatttaaatgaaaaccgtacct 71
Query: 399 gattacactcgtcttatcaaataccaatccacacatcgtttcgcaattgtgctagcgttg 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gattacactcgtcttatcaaataccaatccacacatcgtttcgcaattgtgctagcgttg 131
Query: 459 aaaaattattctgtgttaatatttggctaaaataaaagcaaaatgtcacaatctcgccta 518
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aaaaattattctgcgttaatatttggctaaaataaaagcaaaatgtcacaatctcgccta 191
Query: 519 aaatcttgtattcctctgccaattgaccacaagatgctggtgtctgtgatagaaaaagcg 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaatcttgtattcctctgccaattgaccacaagatgctggtgtctgtgatagaaaaagcg 251
Query: 579 aaggattgggccctgatgcacggagttgggatgcgagataaaaaacatttcaacaaagat 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaggattgggccctgatgcacggagttgggatgcgagataaaaaacatttcaacaaagat 311
Query: 639 gtcattcagattgcgccatttgttcttctgccatcaccattccctcggacagagtttaac 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtcattcagattgcgccatttgttcttctgccatcaccattccctcggacagagtttaac 371
Query: 699 aaagcagttgagctacagccaatattaaatgaattaatgcacaaggttgcacatgacgat 758
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agagcagttgagctacagccaatattaaatgaattaatgcacaaggttgcacatgacgat 431
Query: 759 gaatttctggaaaagacactacaaaatgcactccaggtcgatgagttcacagcaaatctg 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaatttctggaaaagacactacaaaatgcactccaggtcgatgagttcacagcaaatctg 491
Query: 819 tttgatatatgggttaaagtaagggaagagggcataacacag 860
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tttgatatatgggttaaagtaagggaagagggcataacacag 533
>BF01043A1E06
Length = 697
Score = 319 bits (161), Expect = 1e-86
Identities = 170/174 (97%)
Strand = Plus / Plus
Query: 1141 gttatatccttcgtcaattgggacatggtgatcttataaaaaatatgccagagaatcgag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 524 gttatatccttcgtcaattgggacatggtgatcttataaaaaatatgccagnnnatcgag 583
Query: 1201 ctctgtcaggtctatgcactggcatcacggatgcctacgacctgttcggagtaccatcgg 1260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 584 ctctgtcaggtctatgcactggcatcacggatgcctacgacctgttcggagtaccatcag 643
Query: 1261 ctgttgttctgtttgtggttgaggaggtgtcctacaacatttgcgatcaaaggt 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ctgttgttctgtttgtggttgaggaggtgtcctacaacatttgcgatcaaaggt 697
>BF01040B2H05
Length = 780
Score = 252 bits (127), Expect = 2e-66
Identities = 130/131 (99%)
Strand = Plus / Plus
Query: 1011 tcgctcagcttcgggctcttcagatcggactacttgatgcaaagggacggtaaccggatc 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tcgctcagcttcgggctcttcagatcggactacttgatgcaaagggacggtaaccggatc 675
Query: 1071 aaacaagtggagtttaacactatagcgtcgagttttggcgcccttacctcacacctgccc 1130
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 676 aaacaagtggagtttaacactatagcgtcgagtttttgcgcccttacctcacacctgccc 735
Query: 1131 gctatgtctcg 1141
|||||||||||
Sbjct: 736 gctatgtctcg 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 403,341
Number of extensions: 11631
Number of successful extensions: 11631
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 11631
Number of HSP's successfully gapped: 3
Length of query: 2593
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2576
Effective length of database: 8,119,229
Effective search space: 20915133904
Effective search space used: 20915133904
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)