BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19279 (UTR included)
(2503 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1148_C1 1518 0.0
>BF14_1148_C1
Length = 786
Score = 1518 bits (766), Expect = 0.0
Identities = 781/786 (99%)
Strand = Plus / Plus
Query: 435 ttgcatattttgaagtttcgtattagaagcggtaaaaaatattagttaagtaatttaatt 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcatattttgaagtttcgtattagaagcggtaaaaaatattagttaagtaatttaatt 60
Query: 495 aacattatgtctgaatccgaaagtgccgaagttatcgaagaaacaaaacttgataacagc 554
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 aacattatgtctgaatccgaaagtgccgaagttatcgaagaaacaaaacttgataatagc 120
Query: 555 ccccgaaaacgggttcgacatcggaaaaagcagatatatgagaatattatgaaacaaatg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccccgaaaacgggttcgacatcggaaaaagcagatatatgagaatattatgaaacaaatg 180
Query: 615 gaattctactttagcgatgctaatctcagtaaagatagatttttaggggatttggttaaa 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaattctactttagcgatgctaatctcagtaaagatagatttttaggggatttggttaaa 240
Query: 675 aacgatccctatgtaccgataacagaatttttgaaatttaataagattcgatctatgact 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacgatccctatgtaccgataacagaatttttgaaatttaataagattcgatctatgact 300
Query: 735 caggatgttggtgatattgttaaggccatgaagcactcaacttttttggaattatcagaa 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caggatgttggtgatattgttaaggccatgaagcactcaacttttttggaattatcagaa 360
Query: 795 gacaaaaccaaagtcgctcggaaaactcccatgcttccatatgatgcagaccagaggacc 854
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacaaaaccaaagtcgctaggaaaactcccatgcttccatatgatgcagaccagaggacc 420
Query: 855 atctatgttgagtcaataccagttacagcaagtcttaattggctggatagagtcttctct 914
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 atctatgttgagtcaataccagttacagcaagtcttaattggctggatagagttttctct 480
Query: 915 gactatggacaagttgcatatatatcactgccaaagtttaagaactcacagaaaaacaag 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gactatggacaagttgcatatatatcactgccaaagtttaagaactcacagaaaaacaag 540
Query: 975 ggttttgcattcatagaatttgcatcacctcaagacgctcaaaactgtatcagtacattt 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggttttgcattcatagaatttgcatcacctcaagacgctcaaaactgtatcagtacattt 600
Query: 1035 accaaaatgggatgtaaattaccgtcatgtatgcccccggaggaattatcttccatcaaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accaaaatgggatgtaaattaccgtcatgtatgcccccggaggaattatcttccatcaaa 660
Query: 1095 atgttcagtgcggaaccagcggagttatcagagaacaactatgagcctcctaaaaagaaa 1154
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgttcagtgcggaaccagcagagttatcagagaacaactatgagcctcctaaaaagaaa 720
Query: 1155 tctaaaaagattaaggagaaaaaaccgaaaggcctagacctaaaacaggacgagtctgat 1214
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 721 tctaaaaagattaaggagaaaaaaccgaaaagcctagacctaaaacaggacgagtctgat 780
Query: 1215 agtgaa 1220
||||||
Sbjct: 781 agtgaa 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,209
Number of extensions: 6596
Number of successful extensions: 6596
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6596
Number of HSP's successfully gapped: 1
Length of query: 2503
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2486
Effective length of database: 8,119,229
Effective search space: 20184403294
Effective search space used: 20184403294
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)