BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19286 (UTR included)
(4732 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2E03 1386 0.0
>BF01051B2E03
Length = 832
Score = 1386 bits (699), Expect = 0.0
Identities = 737/752 (98%)
Strand = Plus / Plus
Query: 2586 agccagccgtctatggatatcaaaggtttgctgctgaacgccaatcaaaatggccgtctg 2645
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 81 agccagccgcctatggatatcaaaggattgctgctgaacgccaatcaaaatggccgtctg 140
Query: 2646 actatcacgataccctggatagtgcactacttatcgatgttggactacactaccctaaga 2705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 actatcacgataccctggatagtgcactacttatcgatgttggactacactaccctaaga 200
Query: 2706 ctgaagtactatcaaaatatattaaaactacttttcgatatacataggaagttaaatata 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaagtactatcaaaatatattaaaactacttttcgatatacataggaagttaaatata 260
Query: 2766 acagcattcaagaagaacactgtgatattccttaagctcaacttaggctggttgttcgat 2825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagcattcaagaagaacactgtgatattccttaagctcaacttaggctggttgttcgat 320
Query: 2826 ctgccccatgtaccacaagaggtgttttacgctaagaatgacactagtgttggtgttgcc 2885
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgccccatgtaccgcaagaggtgttttacgctaagaatgacactagtgttggtgttgcc 380
Query: 2886 agtgtaattgattgtgaatttgatatcgaggaacatgtgttgcaagaactctgcccctac 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgtaattgattgtgaatttgatatcgaggaacatgtgttgcaagaactctgcccctac 440
Query: 2946 ttgaaggatctcagtgtatttttaagtacatcccgagttagccaggattcgaaccagttt 3005
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ttgaaggatctcagtgtatttttaagtacatcccgagttagccaggactcgaaccagttt 500
Query: 3006 ggcagcttcagacatataacacctgtgagtctcggtttaaacaatgaggataagatccgg 3065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcagcttcagacatataacacctgtgagtctcggtttaaacaatgaggataagatccgg 560
Query: 3066 aacaaggagaaggaactgcagatgcgtttggaagaggagcttatcaaaagccagccatct 3125
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 aacaaggagaaggaactgcagatgcggttggaagaggagcttatcaaaagccagccatct 620
Query: 3126 tcaactcggagagtgttagagctggtgacagagagggttacatcagcagcgatcaaggag 3185
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 tcaactcggagagtgttagagctggtgactgagagggttacatcagcagcgatcaaggag 680
Query: 3186 ctcactacaaataccctcgtggaagccaggaagaaatccagggcgggcgctgcggctata 3245
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 681 ctcactacaaataccctcgtggaagccaggannnnntccagggcaggcgctgcggctata 740
Query: 3246 gtggctgggtgcagagacaggtcgggtctactctcgtctctacagagccactattccgcc 3305
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtggctgggtgcagnnacaggtcgggtctactctcgtctctacagagccactattccgcc 800
Query: 3306 cagttatgctctctcaatgccagcgcgctctc 3337
||||||||||||||||| ||||||||||||||
Sbjct: 801 cagttatgctctctcaacgccagcgcgctctc 832
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 528,145
Number of extensions: 17260
Number of successful extensions: 17260
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17260
Number of HSP's successfully gapped: 1
Length of query: 4732
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4714
Effective length of database: 8,109,745
Effective search space: 38229337930
Effective search space used: 38229337930
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)