BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19290 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2F02 1469 0.0
BF01023B1B08 460 e-129
>BF01056B2F02
Length = 783
Score = 1469 bits (741), Expect = 0.0
Identities = 776/785 (98%), Gaps = 2/785 (0%)
Strand = Plus / Plus
Query: 879 agaaacacaaaaataaaggatcaccaatgctttgagtgtcagatatgtaaaaaaagtttt 938
|||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 1 agaagcacaaaaataaaggatcaccaatgctttgaatgccagatatgtaaaaaaagtttt 60
Query: 939 atatcaatgcaaaagatgttgaaccacaggcacagacagcatcaaaagaaatctgtcttc 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatcaatgcaaaagatgttgaaccacaggcacagacagcatcaaaagaaatctgtcttc 120
Query: 999 atttgtgacatgtgtcacaaggagtttctacataagaactccttgttaaaacacatagga 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttgtgacatgtgtcacaaggagtttctacataagaactccttgttaaaacacatagga 180
Query: 1059 tggcacatggggataaataaaagatttatatgcgagatatgtggatattcatttcacgat 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcacatggggataaataaaagatttatatgcgagatatgtggatattcatttcacgat 240
Query: 1119 aagacaaatttaaacgttcatttacaggccgtccatcagaaactgaagttatacacgtgt 1178
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 241 aagacaaatttaaacgttcatttacaggccgtgcatcagaaactgaagttatacacgtgt 300
Query: 1179 acactgtgtccaaaaaaattcgctgcgaataagaatttaaaaatacatttccgtcttcac 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acactgtgtccaaaaaaattcgctgcgaataagaatttaaaaatacatttccgtcttcac 360
Query: 1239 agcggcgaacggccgtataaatgtgatgtttgcgatgaaggttttatatgttcgacctat 1298
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 agcggcgaacggccgtataaatgtgatgtttgtgatgaaggttttatatgttcgacctat 420
Query: 1299 ctggtgaagcataaacaaaaacatgacaatgtcaaaaaatttggcgggaaatacgtttgt 1358
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 ctggtgaagcataaacaaaaacatgacaatgtcaaaaaatttgg-gggaaatacgtttgt 479
Query: 1359 aaggtttgcagtactgttttcaacgagcggcatgttttcacggcgcatatgcgttctcac 1418
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 480 aaggtttgcagtactgttttcaacgagcggcatgtttttacggcgcatatgcgttctcac 539
Query: 1419 gtcggtgttaagccgtacagatgtagttactgcgaaaaggatttctttacacgtttctct 1478
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 540 gtcggtgttaagccgtacagatgtagttactgcgaaaaggatttcttt-cacgtttctct 598
Query: 1479 ctcaaacgacacaacgaaaatcaacataacgaaaacatcgtatgtaaaaaatgcgacgcc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ctcaaacgacacaacgaaaatcaacataacgaaaacatcgtatgtaaaaaatgcgacgcc 658
Query: 1539 attttttctgataaaacaaatttacagcggcatgtcaaaatgcacggtaaagagaaaaag 1598
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 659 attttttctgataaaacaaatttacagcggcatgtcaaaatgcatggtaaagagaaaaag 718
Query: 1599 tcgtgatggatccaaatgttccgagaatcataacctcagtgataaaagtaaaaaagtgtt 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcgtgatggatccaaatgttccgagaatcataacctcagtgataaaagtaaaaaagtgtt 778
Query: 1659 taacg 1663
|||||
Sbjct: 779 taacg 783
>BF01023B1B08
Length = 419
Score = 460 bits (232), Expect = e-129
Identities = 291/315 (92%)
Strand = Plus / Plus
Query: 841 agtcaaatatatcttataaggaacgtaagaaagataaaagaaacacaaaaataaaggatc 900
|||| ||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct: 105 agtccaatatatcttataaggaacgtctgaaagataaaacaaacacgnnnntaaaggatc 164
Query: 901 accaatgctttgagtgtcagatatgtaaaaaaagttttatatcaatgcaaaagatgttga 960
|||| ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 165 accanngctttgaatgtcngatatgtaaaaaaagttttatatcaatgcagaagatgttga 224
Query: 961 accacaggcacagacagcatcaaaagaaatctgtcttcatttgtgacatgtgtcacaagg 1020
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 accacaagcacannnnnnatcaaaagaaatctgtcttcatttgtgacatgtgtcacaagg 284
Query: 1021 agtttctacataagaactccttgttaaaacacataggatggcacatggggataaataaaa 1080
||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 285 agtttctacataaaaactccttgttaaaacacatatggtggcacatggggataaataaaa 344
Query: 1081 gatttatatgcgagatatgtggatattcatttcacgataagacaaatttaaacgttcatt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gatttatatgcgagatatgtggatattcatttcacgataagacaaatttaaacgttcatt 404
Query: 1141 tacaggccgtccatc 1155
|||||||||||||||
Sbjct: 405 tacaggccgtccatc 419
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 326,348
Number of extensions: 7648
Number of successful extensions: 7648
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7646
Number of HSP's successfully gapped: 2
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)