BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19298 (UTR included)
(1627 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B2A04 1495 0.0
BF14_3052_C1 115 2e-25
>BF01029B2A04
Length = 795
Score = 1495 bits (754), Expect = 0.0
Identities = 786/796 (98%), Gaps = 1/796 (0%)
Strand = Plus / Plus
Query: 405 cttttgttatattattttcgttaacaatatttttatgtttcctttcaatgaaataaataa 464
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cttttgttatattattttcgttaacaatatttttatgattcctttcaatgaaataaataa 60
Query: 465 tttgtttataaagaaaatatatgtcaaaaaataaccatggaaggcctttatcatcaaacg 524
||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 tttgtatataaaggaaatatatgtcaaaaaataaccatggaagccctttatcatcaaaca 120
Query: 525 actcaattaatacaggaaacatcaaatttatttcataaattagaaaatgatccagatgca 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actcaattaatacaggaaacatcaaatttatttcataaattagaaaatgatccagatgca 180
Query: 585 gagaaaatagaaggtgccatccaagaaaagataaatacaattaaagcaaattgtgaaaaa 644
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 gagaaaattgaaggtgccatccaagaaaagataaatataattaaagcaaattgtgaaaaa 240
Query: 645 ttagatgttctccttttcaagacaccaataaatcaaaggcctatggcaaagatgagagtt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttagatgttctccttttcaagacaccaataaatcaaaggcctatggcaaagatgagagtt 300
Query: 705 gaccaattgaaatatgacaacacacatatacaggcatctttaaccaatgctcgaaacaaa 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccaattgaaatatgacaacacacatatacaggcatctttaaccaatgctcgaaacaaa 360
Query: 765 aggtacaggcgggaacaagaaaaggctgagagagaacaattgttgagtcgtagatttggt 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtacaggcgggaacaagaaaaggctgagagagaacaattgttgagtcgtagatttggt 420
Query: 825 catgatcatacagagattaatgtggactacttgggccaagaacaatcatcactgcagaat 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgatcatacagagattaatgtggactacttgggccaagaacaatcatcactgcagaat 480
Query: 885 tcacataggaatgtcgatgaaatgttgcacacaggtacaagcattctagagacgttaagg 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcacataggaatgtcgatgaaatgttgcacacaggtacaagcattctagagacgttaagg 540
Query: 945 tacaatcgtgacacattgaaaggcgctcatagacggatgatagacttggcgaataccctg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tacaatcgtgacacattgaaaggcgctcatagacggatgatagacttggcgaataccctg 600
Query: 1005 ggcctgtccaacgccaccatcaccctcatagagagaagggtctcccaggataagtacgtc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggcctgtccaacgccaccatcaccctcatagagagaagggtctcccaggataagtacgtc 660
Query: 1065 ctcttcggagggatgttcgtcaccctgagtgtgatcgcgcttgttataatatatttggta 1124
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcttcggnnggatgttcgtcaccctgagtgtgatcgcgcttgttataatatatttggta 720
Query: 1125 taaaaaaaatttacaaaaatctacgcattgttatctatttgtggacatatgattaagtat 1184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 t-aaaaaaatttacaaaaatctacgcattgttatctatttgtggacatatgattaagtat 779
Query: 1185 ttatgcattctaatga 1200
||||||||||||||||
Sbjct: 780 ttatgcattctaatga 795
>BF14_3052_C1
Length = 1419
Score = 115 bits (58), Expect = 2e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 1 tatttatgtcataaacggaaatgagagtgactcaatattagtcaataggtactcaatttg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tatttatttcataaacggaaatgagagtgactcaatattagtcaataggtactcaatttg 17
Query: 61 at 62
||
Sbjct: 16 at 15
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,147
Number of extensions: 14091
Number of successful extensions: 14091
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14090
Number of HSP's successfully gapped: 2
Length of query: 1627
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1610
Effective length of database: 8,119,229
Effective search space: 13071958690
Effective search space used: 13071958690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)