BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19307 (UTR included)
(1669 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3499_C1 1810 0.0
>BF14_3499_C1
Length = 946
Score = 1810 bits (913), Expect = 0.0
Identities = 937/946 (99%)
Strand = Plus / Plus
Query: 510 aggagcttggccggtaattgtgggattattgtgtttctgattgcccttgtgactgtggca 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcttggccggtaattgtgggattattgtgtttctgattgcccttgtgactgtggca 60
Query: 570 ttggcattcggtacgcctagctggcttgttagcgactataggatacgaggagctaaattg 629
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 ttggcattcggtacgcctagctggcttgttagcgactatagaatacgaggagctaaattg 120
Query: 630 gacagattgggattatggagtcattgtttccgatctctagcggatccattggaccagtat 689
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacagattgggcttatggagtcattgtttccgatctctagcggatccattggaccagtat 180
Query: 690 caaagacggttcttcgtcggatgccgctgggtgtacgaccctttcactaccggatacgat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaagacggttcttcgtcggatgccgctgggtgtacgaccctttcactaccggatacgat 240
Query: 750 aaaatacgcggctatttgttaccaggtttcatgatagccacgcagttgttcttcacatta 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaatacgcggctatttgttaccaggtttcatgatagccacgcagttgttcttcacatta 300
Query: 810 tgcctcatcggtgtcatggtgtctacggttcttgtaatcatatttttcctctgctgcggc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcctcatcggtgtcatggtgtctacggttcttgtaatcatatttttcctctgctgcggc 360
Query: 870 ccgaatcagaatagattcgttatgatcataaaaactataggttatatcatgttagcagca 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccgaatcagaatagattcgttatgatcataaaaactataggttatatcatgttagcagca 420
Query: 930 ggtctaagtggaggtttggctgttataatatttgcatgtttcggtaacactgacggctgg 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtctaagtggaggtttggctgttataatatttgcatgtttcggtaacactgacggctgg 480
Query: 990 atgccagatcatgcgaacaattacttcggttggtcgttcgctctgggcgtggttggttct 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgccagatcatgcgaacaattacttcggttggtcgttcgctctgggcgtggttggttct 540
Query: 1050 gtggcgtgtctcgtcacctccgctctcttcctcaccgaagcgaacattcagatgaagaaa 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtggcgtgtctcgtcacctccgctctcttcctcaccgaagcgaacattcagatgaagaaa 600
Query: 1110 cgcaaacgtctcaaggagtcccaggcccgattcgaactggagaccgagactaaggcttaa 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgcaaacgtctcaaggagtcccaggcccgattcgaactggagaccgagactaaggcttaa 660
Query: 1170 ttttataacgtgtgttcggtgccttattttaattccgtccttttttgtgttctatattta 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttttataacgtgtgttcggtgccttattttaattccgtccttttttgtgttctatattta 720
Query: 1230 aggctatgtataagattttttgacacctccaatgtctattgaatacagataatgaatgtt 1289
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agactatgtataagattttttgacacctccaatgtctattgaatacagataatgaatgtt 780
Query: 1290 ttgtatgaaatatattttattgtagtgtaacaaatgtgtaaaatcacaaatcatcgtctt 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 781 ttgtatgaaatatattttattgtagtgtaacaaatgtgtaaaatcacaaatcaacgtctt 840
Query: 1350 acttcgttttatacaacgcccttaatattttctaggtaaatctattttctttttatagat 1409
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
Sbjct: 841 acttcgttttatacaacgcccttattatcttctaggtaaatctattttctttttatnnnt 900
Query: 1410 tttcattttttataacttaactttatgattaaagtaatcatatttt 1455
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tttcattttttataacttaactttatgattaaagtaatcatatttt 946
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,616
Number of extensions: 4681
Number of successful extensions: 4681
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4679
Number of HSP's successfully gapped: 1
Length of query: 1669
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1652
Effective length of database: 8,119,229
Effective search space: 13412966308
Effective search space used: 13412966308
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)