BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19309 (UTR included)
(2107 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B1D04 983 0.0
>BF01015B1D04
Length = 510
Score = 983 bits (496), Expect = 0.0
Identities = 506/510 (99%)
Strand = Plus / Plus
Query: 1229 tcttaagttgtgcttccttggaatattaaggtacgaaataaaagaaatgatacaaaaaat 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttaagttgtgcttccttggaatattaaggtacgaaataaaagaaatgatacaaaaaat 60
Query: 1289 tagaattttacgaagcgagctcggtgcaggcgagctacttgatggtagtccgatgcatgg 1348
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 tagaattttacgaagcgagctcggtgcaggcgagctacttgaaggtagtccgatgcatgg 120
Query: 1349 tggtcctttatcgcaaactgtggtagtgaacgctgtgaacgctaacgggggcgtgcgcac 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtcctttatcgcaaactgtggtagtgaacgctgtgaacgctaacgggggcgtgcgcac 180
Query: 1409 tcatggtggcagtccagaaagagctggagagagagaggctcttctaggtcgagctgcgga 1468
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 tcatggtggcagtccagaaagagctggagagagagaggctctcctaggtcgagctgcgga 240
Query: 1469 accctgttcacgacgtagcttacacgacgaacccctaggtccaaagacagtaaacggaaa 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accctgttcacgacgtagcttacacgacgaacccctaggtccaaagacagtaaacggaaa 300
Query: 1529 caacaattgcgagatgcgtgaactagctcgaggtgaataccgacccctggcagcagataa 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacaattgcgagatgcgtgaactagctcgaggtgaataccgacccctggcagcagataa 360
Query: 1589 cgcggcaaccagaatctgactaagatgttacttggagcggctgttcgggcggcgatggag 1648
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 361 cgcggcaaccagaatctgactaagatgttacttggagcggctgttcnngcggcgatggag 420
Query: 1649 gtcgttcccggcagacggcttcgaggtagagcccccgctggcgcgtggcgtgccagtgtg 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtcgttcccggcagacggcttcgaggtagagcccccgctggcgcgtggcgtgccagtgtg 480
Query: 1709 catgcgacggacgggggcacgcgtgcgtct 1738
||||||||||||||||||||||||||||||
Sbjct: 481 catgcgacggacgggggcacgcgtgcgtct 510
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 188,654
Number of extensions: 3553
Number of successful extensions: 3553
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3553
Number of HSP's successfully gapped: 1
Length of query: 2107
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2090
Effective length of database: 8,119,229
Effective search space: 16969188610
Effective search space used: 16969188610
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)