BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19328 (UTR included)
(1252 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B1G10 74 6e-13
BF01049B2H03 72 2e-12
BF14_729_C3 72 2e-12
BF01052B1F12 68 4e-11
BF01012A1E04 68 4e-11
>BF01019B1G10
Length = 488
Score = 73.8 bits (37), Expect = 6e-13
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 953 taatatttttcggatt-actacgaaaattttattattttaaaaaccacatattaccgacg 1011
|||||||||||| ||| |||||| |||||||||||||||||||| ||||| | ||||||
Sbjct: 302 taatatttttcgcatttactacgcgaattttattattttaaaaactacataatcccgacg 361
Query: 1012 tttcggtaactttgcatcactcgtgatcacgggcaga 1048
||||||| |||| || | ||||||||||||||||
Sbjct: 362 tttcggttccttttcagtaaccgtgatcacgggcaga 398
>BF01049B2H03
Length = 832
Score = 71.9 bits (36), Expect = 2e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1059 gtaatccgaaaaatattagtttcatttaaatgaata 1094
||||||||||||||||||||||||||||||||||||
Sbjct: 294 gtaatccgaaaaatattagtttcatttaaatgaata 329
>BF14_729_C3
Length = 2041
Score = 71.9 bits (36), Expect = 2e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 978 attttattattttaaaaaccacatattaccgacgtttcggtaactttgcatcactcgtga 1037
|||||||||||| |||||| ||||| | ||||||||||||| |||||||| || |||||
Sbjct: 1662 attttattattt-aaaaactacataatcccgacgtttcggttactttgcagcaaccgtga 1604
Query: 1038 tcacgggcagac 1049
||||||||||||
Sbjct: 1603 tcacgggcagac 1592
>BF01052B1F12
Length = 785
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1062 atccgaaaaatattagtttcatttaaatgaataa 1095
||||||||||||||||||||||||||||||||||
Sbjct: 355 atccgaaaaatattagtttcatttaaatgaataa 322
>BF01012A1E04
Length = 841
Score = 67.9 bits (34), Expect = 4e-11
Identities = 54/58 (93%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 1062 atccgaaaa-atattagtttcatttaaatgaataagact-gtgaaagtcttagatctc 1117
||||||||| ||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 560 atccgaaaatatattagtttcatttaaatgaataaaactcgcgaaagtcttagatctc 617
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 137,792
Number of extensions: 3191
Number of successful extensions: 3191
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3187
Number of HSP's successfully gapped: 5
Length of query: 1252
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1235
Effective length of database: 8,119,229
Effective search space: 10027247815
Effective search space used: 10027247815
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)