BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19331 (UTR included)
(1891 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B2F04 1160 0.0
BF01019B2B09 1070 0.0
>BF01025B2F04
Length = 807
Score = 1160 bits (585), Expect = 0.0
Identities = 600/605 (99%)
Strand = Plus / Plus
Query: 373 ccaaaattaaatttattgaataagtgaataatttcaagcccaaggattttaaaagtcata 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaaaattaaatttattgaataagtgaataatttcaagcccaaggattttaaaagtcata 60
Query: 433 cagctccttgatataaccaatactatcaactatacttattgttaataaaaagcttatcta 492
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 cagctccttgatataaccaatactatcaactatacttattgttaatataaagcttatcta 120
Query: 493 ttaactcgatgtttagcagtaaaacgcaactaagaaagagaacaccagaaaatggaacgg 552
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataactcgatgtttagcagtaaaacgcaactaagaaagagaacaccagaaaatggaacgg 180
Query: 553 atcgcgaaagttatttatcacttttagtcgatgaatacattaattcttcatcgtttgatg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcgcgaaagttatttatcacttttagtcgatgaatacattaattcttcatcgtttgatg 240
Query: 613 ccaaacatcaggttttagcaaatcttgctaactttgcttacgacccaataaactacggtt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaaacatcaggttttagcaaatcttgctaactttgcttacgacccaataaactacggtt 300
Query: 673 ttataagaaatgttggtgtcttagatatatttatccatgtgctaaagaatgcaaataaca 732
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 ttataagaaatgttggtgtcttagatatatttatccatgtgctaaagaatgaaaataaca 360
Query: 733 gtaaactgcttcattttgccacagcaggaatctgcaacttgtgtatagatccagataatg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaactgcttcattttgccacagcaggaatctgcaacttgtgtatagatccagataatg 420
Query: 793 ttgattatattgtgaataatggagctattgaacctatttccactttactcaactccgacc 852
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgattatattgtgaataatggagttattgaacctatttccactttactcaactccgacc 480
Query: 853 atgaagaaacattagctgatgctataacaatatttatttacttatatgacagtcatgcaa 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgaagaaacattagctgatgctataacaatatttatttacttatatgacagtcatgcaa 540
Query: 913 aagataaaatacatgacataaaaacagttaaaaatattgaagcacttattaaatcagaaa 972
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 541 aagataaaatacatgacataaaaacagttaaaaatattgaagcatttattaaatcagaaa 600
Query: 973 atcaa 977
|||||
Sbjct: 601 atcaa 605
Score = 163 bits (82), Expect = 1e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 973 atcaaaagatctgtaagtttcaatcaacattcagccgtgcggctttcaaagctggtgata 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 atcaaaagatctgtaagtttcaatcaacattcagccgtgcggctttcaaagctggtgata 785
Query: 1033 aaataagaatacagaaaactct 1054
||||||||||||||||||||||
Sbjct: 786 aaataagaatacagaaaactct 807
>BF01019B2B09
Length = 615
Score = 1070 bits (540), Expect = 0.0
Identities = 584/601 (97%)
Strand = Plus / Plus
Query: 1291 ttagaaaaatactcaaggttaaatttttctgcattgttgaagaggaaaaaaaggttgtgt 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagaaaaatactcaaggttaaatttttctgcattgttgaagaggaaaaaaaggttgtgt 60
Query: 1351 ttgaaggtgaagcaaagttgatgcttgctaaagactgttaaaattatggattgtgaacta 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaggtgaagcaaagttgatgcttgctaaagactgttaaaattatggattgtgaacta 120
Query: 1411 taagtttatcaaaaagactgtataacattatgaagtgccacagataataatattaaatac 1470
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagttcatcaaaaagactgtataacattatgaagtgccacagataataatattaaatac 180
Query: 1471 aattatgattaacagtacaattataaaagtaattctaatctgtccaccattctgatggtt 1530
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 181 aattatgatcaacagtacaattataaaagtaattttaatctgtccaccattctgattgtt 240
Query: 1531 tttaatacccaaaatatcacaattaaccaacaaagactgatgtcacagattttttgattt 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaatacccaaaatatcacaattaaccaacaaagactgatgtcacagattttttgattt 300
Query: 1591 gaaaaaaaaaaatcacaaaaatgtaatattgtaacttaaatttaaaaattaattcaaatt 1650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaaaaaaaaaatcacaaaaatgtaatattgtaacttaaatttaaaaattaattcaaatt 360
Query: 1651 gtaatttacagaatacagataacatattgaaacagctcaataattttaataagctgtatg 1710
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaatttacagaatacagataatatattgaaacagctcaataattttaataagctgtatg 420
Query: 1711 tacaaataatcaaaaaataaaaatgtagcaataatttatttatttgtaagactaaaatga 1770
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tacaaataatcaaaaaattaaaatgtagcaataatttatttatttgtaagactaaaatga 480
Query: 1771 tattaacacttcctaaatgtgttctgaagttgtatgttattacatgaaaaatatttttcc 1830
|||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 481 tattaaaactccctaaatgtgttctgaatttatatgttattacatgaaaaatatttttcc 540
Query: 1831 actgtatatgtatattgtaatgtgttttatttgttacttttgatgtatcctctgtaaagc 1890
| | |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 541 antnnntatgtatattgtaatgtgttttatttgttannnttgatgtatcctctgtaaagc 600
Query: 1891 t 1891
|
Sbjct: 601 t 601
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 357,962
Number of extensions: 9957
Number of successful extensions: 9957
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9957
Number of HSP's successfully gapped: 3
Length of query: 1891
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1874
Effective length of database: 8,119,229
Effective search space: 15215435146
Effective search space used: 15215435146
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)