BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19336 (UTR included)
(1714 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B1B01 722 0.0
BF01024B2F12 268 3e-71
>BF01055B1B01
Length = 858
Score = 722 bits (364), Expect = 0.0
Identities = 407/423 (96%), Gaps = 10/423 (2%)
Strand = Plus / Plus
Query: 630 attgggatagctaaggactgtagaatgcatgtgcaaaaacttaataaattgagaggagag 689
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13 attgggatagctaaggactgtagaatgcatgtacaaaaacttaataaattgagaggagag 72
Query: 690 aaggatgaaacaatacttgaagaaagttcagaggagtgtagagatgtggatacttctgaa 749
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 73 aaggatgaaaaaatacttgaagaaagttcagaggagtgtatagatgtggatacttctgaa 132
Query: 750 aatagctgtgaaaatatttcttataatacagacattagtaagaatagaagcaaatggtta 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aatagctgtgaaaatatttcttataatacagacattagtaagaatagaagcaaatggtta 192
Query: 810 gcatatgttgatattgataaatctgatacagtagaaaatcagtcccatcaaaaagacagc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcatatgttgatattgataaatctgatacagtagaaaatcagtcccatcaaaaagacagc 252
Query: 870 gaaaatgaaaaatataattcaaggcggcagaacaaaaacatgtactcgaaatgtaagagt 929
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 253 gaaaatgaaaaatataattcaaggcggcagaacaaaaacatgtactcaaaatgtaagagt 312
Query: 930 aaaagaaaaagcagtattgatagtgatactgaattaggtggtagttatgtagaagatgtt 989
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaaagaaaatgcagtattgatagtgatactgaattaggtggtagttatgtagaagatgtt 372
Query: 990 attgaagac----------aaaaaaaaaatatgttacatgaaaaaaaaatatttaccaca 1039
||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attgaagacagggatgaagacaaaaaaaatatgttacatgaaaaaaaaatatttaccaca 432
Query: 1040 gag 1042
|||
Sbjct: 433 gag 435
>BF01024B2F12
Length = 795
Score = 268 bits (135), Expect = 3e-71
Identities = 137/138 (99%)
Strand = Plus / Minus
Query: 1546 acgatgtctattacttattttattcaaataaattattattatttttaatcgactagaagg 1605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acgatgtctattacttattttattcaaataaattattattatttttaatcgactagaagg 736
Query: 1606 ccgcggtatgtcgacgccggtgcaactctctggctcttgcatatctacgaccatagccac 1665
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 735 ccgcggtatgtcgacgccggtgcaactctctgnctcttgcatatctacgaccatagccac 676
Query: 1666 tccatcgccatgcccttt 1683
||||||||||||||||||
Sbjct: 675 tccatcgccatgcccttt 658
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,999
Number of extensions: 10497
Number of successful extensions: 10497
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10497
Number of HSP's successfully gapped: 3
Length of query: 1714
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1697
Effective length of database: 8,119,229
Effective search space: 13778331613
Effective search space used: 13778331613
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)