BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19349 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1C02 1100 0.0
>BF01044B1C02
Length = 851
Score = 1100 bits (555), Expect = 0.0
Identities = 582/591 (98%)
Strand = Plus / Minus
Query: 681 gagcgtatggtccaaataacacgacagaaagtcggcggattgggtctgagtataaagggt 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gagcgtatggtccaaataacacgacagaaagtcggcggattgggtctgagtataaagggt 541
Query: 741 gggtccgagcacaaactgcccatactgatatccaagatatacaaggaccaggcggcggat 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gggtccgagcacaaactgcccatactgatatccaagatatacaaggaccaggcggcggat 481
Query: 801 cagacaggacaactgttcgtaggggacgccgtcattaaaggtgagatacttaatgcttac 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cagacaggacaactgttcgtaggggacgccgtcattaaaggtgagatacttaatgcttac 421
Query: 861 actaaccttaatgtaattcaattgccatacagaaggatgtcatagccagtgaaggtttac 920
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 420 actaaccttaatgtaattcaattgccatacagaaggatgtcatagccagtgaaaatttac 361
Query: 921 cttctgaaaatgcattagtaaatttttgaaccttaccaagcatactcaaagtaaagctcc 980
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
Sbjct: 360 cttctgaaaatgcattagtaaatttttgtaccttaccaagcatactcaaagtaaacctgc 301
Query: 981 gatgacactgttatgactgaaattatattaacgaaaaactgcatattgtctgtttagtgt 1040
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gatgacactgtcatgactgaagttatattaacgaaaaactgcatattgtctgtttagtgt 241
Query: 1041 gactatcctagctcgcgctaaggatactgctatgttataggtacttttttggtctctggt 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gactatcctagctcgcgctaaggatactgctatgttataggtacttttttggtctctggt 181
Query: 1101 ccttactatctctatttgtgatatgtttagcttaatgtcacacagaacactgtgatgttt 1160
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 180 ccttgctatctctatttgtgatatgtttagcttaatgtcacacagagcactgtgatgttt 121
Query: 1161 atcagatgttacaatgatagcaatcttcgcgtgcaaactttaccgcagtatattatttgt 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atcagatgttacaatgatagcaatcttcgcgtgcaaactttaccgcagtatattatttgt 61
Query: 1221 attgtgaatgttttatgtccagtactagactaaacgcgacaataacgtgct 1271
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 attgtgaatgttttatgtccagtactagactaaacgcgacaataacgtgct 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 165,714
Number of extensions: 3208
Number of successful extensions: 3208
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3208
Number of HSP's successfully gapped: 1
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)