BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19355 (UTR included)
(3061 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B2F04 769 0.0
>BF01050B2F04
Length = 655
Score = 769 bits (388), Expect = 0.0
Identities = 461/486 (94%), Gaps = 6/486 (1%)
Strand = Plus / Minus
Query: 2119 agagccaggagctgtcaaaagtgaagatcgacatcgacgagctgcggtcactgtcctcgc 2178
||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 520 agagccaagagctgtcaaaggtgaagatcgacatcgacgagttgcggtccctgtcctcgc 461
Query: 2179 tcggcatcgacgtggacttcctcaacgagctggagatggccaccaaggactacggcctag 2238
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tcggcattgacgtggacttcctcaacgagctggagatggccaccaaggactacggcctag 401
Query: 2239 gacccgcgcttaaacacacatacggcctcctcgccgccctcgagaaggagcagcgggaac 2298
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 400 gacccgcgcttaaacacnagtacggcctcctcgccgccctcgagaaggagcagcgagaac 341
Query: 2299 gtctgtccgcgtcgtctccgtggcacctgtcgctggtggcgggcgcgggccaggcggagc 2358
|||||||||||| || |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 340 gtctgtccgcgttgtttccgtggcacctgtcgctagtggcgggtgcgggccaggcggagc 281
Query: 2359 gcgaggcggcgcgggcggcggcgggctggctgcgggccatggtggccagggtcccgccca 2418
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 280 ccgaggcggcgcgggcggcggcgggctggctgcgggccatggtggccagggtccccccca 221
Query: 2419 aggaggtcgccacacacgccgccctcaggaacgccatgggcgtcaccctggagcatctcg 2478
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 220 aggaggtcgccacacacgccgccctcaggaacgccatgggggtcaccctggagcatctcg 161
Query: 2479 ------ggctggccgtggacgacttcgaggagctgcacgagccgcgggactcctccgaca 2532
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 acactccgctggccgtggacgacttcgaggagctgcacgagccgcgggactcctccgaca 101
Query: 2533 gggactcgcgctccagcagagacaagtgaccgcccgaaatagattaataaaatattgaga 2592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 100 gggactcgcgctccagcagagacaagtgaccgcccgaaatagattaataaaatattgggg 41
Query: 2593 ctgaaa 2598
||||||
Sbjct: 40 ctgaaa 35
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,415
Number of extensions: 5326
Number of successful extensions: 5326
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5326
Number of HSP's successfully gapped: 2
Length of query: 3061
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3043
Effective length of database: 8,109,745
Effective search space: 24677954035
Effective search space used: 24677954035
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)