BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19363 (UTR included)
(1300 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B2D07 1096 0.0
>BF01041B2D07
Length = 747
Score = 1096 bits (553), Expect = 0.0
Identities = 553/553 (100%)
Strand = Plus / Plus
Query: 568 aacgcggtcccgcacaatactcctaccacagcatgttcgttgcggcggctgacagcgccg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aacgcggtcccgcacaatactcctaccacagcatgttcgttgcggcggctgacagcgccg 254
Query: 628 ccttatggcgttgcaagtcatgcggcaaggaggtgtccaaccgctggcaccactaccact 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccttatggcgttgcaagtcatgcggcaaggaggtgtccaaccgctggcaccactaccact 314
Query: 688 ctcacaccgcccaacgatctctctgcccctactgccccgctacatacagccgcatcgaca 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctcacaccgcccaacgatctctctgcccctactgccccgctacatacagccgcatcgaca 374
Query: 748 cactgagatctcatctccgcaacaaacacaccgctctgctgctcaaacactaaacgcaaa 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cactgagatctcatctccgcaacaaacacaccgctctgctgctcaaacactaaacgcaaa 434
Query: 808 cgcccccgaccccgaccccgatctatgcgaaagtgcaccgaatttgcatcgacttaccca 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cgcccccgaccccgaccccgatctatgcgaaagtgcaccgaatttgcatcgacttaccca 494
Query: 868 ctgagaatactgacgtgtttcattcaaactgatcataatgtaaagtttataaatgaaaaa 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctgagaatactgacgtgtttcattcaaactgatcataatgtaaagtttataaatgaaaaa 554
Query: 928 tctcggtagttttagaattttagttgatgccagttcgtatgcgcactgtattatattgac 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tctcggtagttttagaattttagttgatgccagttcgtatgcgcactgtattatattgac 614
Query: 988 gtgttttgtcatgattcttcgagtattagataatttatagcacgtttttgtgcattgttt 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgttttgtcatgattcttcgagtattagataatttatagcacgtttttgtgcattgttt 674
Query: 1048 attgttctatgtatggtaaatgttgtcaacagggtaaaattatgaattgggtaggtattt 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 attgttctatgtatggtaaatgttgtcaacagggtaaaattatgaattgggtaggtattt 734
Query: 1108 tggactacttatc 1120
|||||||||||||
Sbjct: 735 tggactacttatc 747
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,748
Number of extensions: 18605
Number of successful extensions: 18605
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18603
Number of HSP's successfully gapped: 1
Length of query: 1300
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1283
Effective length of database: 8,119,229
Effective search space: 10416970807
Effective search space used: 10416970807
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)