BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19368 (UTR included)
(3388 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1B09 1009 0.0
BF01030B2B11 529 e-150
>BF01009A1B09
Length = 541
Score = 1009 bits (509), Expect = 0.0
Identities = 534/541 (98%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 1305 ggaacatttatatactctcctctgaccacatatttac-tggatgaatacggctggagagg 1363
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggaacatttatatactctcccctgaccacatatttacgtggatgaatacggctggagagg 60
Query: 1364 cgccttgttattgctggctggcacggtacttaacgtttgtgtatgcggtacagttatgag 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgccttgttattgctggctggcacggtacttaacgtttgtgtatgcggtacagttatgag 120
Query: 1424 ggatcctgaatggcttatcttagaacaaaagaagcagagaaaactaagtaaatcgaagag 1483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 ggatcctgaatggcttatcttagaacaaaagaagcagagaaaactaattaaatcgaagag 180
Query: 1484 aggatccagctctacgtcgatatctgccaaatccggcggtgctgaatccgtgtatcccgg 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggatccagctctacgtcgatatctgccaaatccggcggtgctgaatccgtgtatcccgg 240
Query: 1544 tgctgaggaactgaaaagcttaattaatagtggcgaagcaccagagcacatactctctgc 1603
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 241 tgctgaggaactgagaagcttaattaatagtggcgaagcaccggagcacatactctctgc 300
Query: 1604 cctgatatcagctattgccgaggctgaaaatgtagaggcagtgacgaaaatgaacgctga 1663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actgatatcagctattgccgaggctgaaaatgtagaggcagtgacgaaaatgaacgctga 360
Query: 1664 tttaacgcaacaacagaaagtcagttctgttttaaatttaccaacgtttttgaaacaaag 1723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 tttaacgcaacaacagaaagtcagttctgttttaaatttaccaacgtttttgaaacagag 420
Query: 1724 tgaaaggttgcctccagaagttatagatcaacttgcgactaacgagcggctgtataacat 1783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaaaggttgcctccagaagttatagatcaacttgcgactaacgagcggctgtataacat 480
Query: 1784 aatacttcaaaattatccgtcgctattagctttgaggactggctcagattccaaacttac 1843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatacttcaaaattatccgtcgctattagctttgaggactggctcagattccaaacttac 540
Query: 1844 c 1844
|
Sbjct: 541 c 541
>BF01030B2B11
Length = 301
Score = 529 bits (267), Expect = e-150
Identities = 292/301 (97%)
Strand = Plus / Plus
Query: 2393 actgggatggtttggcgaccttccttgggtcaacataacaaagacatacgcgatgtgttt 2452
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 actgggatggtttggcgaccttccttgggtaaacataacaaagacatacgcgatgtgttt 60
Query: 2453 agtagcttgcggtataacgatcgtgctcttccctatcctgatacgagttatggacgcgag 2512
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 agtagcttgcggcataacgatcgtgctcttccctatcctgatacgagttatggacgctag 120
Query: 2513 ggagagctacagcttctacatactggcgctgaactcattgttcttcggattaaccttctc 2572
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 121 ggagagctacagcttctacatactggcgctgaactcgttgttcttcggattaaccttctc 180
Query: 2573 cagttcgtattcgtatacgccgagtattctggtggaattgatagcgctggagcgtttcac 2632
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttcgaattcgtatannccgagtattctggtggaattgatagcgctggagcgtttcac 240
Query: 2633 catggcgtatggattggtgctgttgagtcaagggattggacatttgattggaccgcccat 2692
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 241 catggcgtatggattggtgctgatgagtcaagggattggacatttgatcggaccgcccat 300
Query: 2693 g 2693
|
Sbjct: 301 g 301
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 347,621
Number of extensions: 6237
Number of successful extensions: 6237
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6236
Number of HSP's successfully gapped: 2
Length of query: 3388
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3370
Effective length of database: 8,109,745
Effective search space: 27329840650
Effective search space used: 27329840650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)