BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19373 (UTR included)
(2023 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2C02 1604 0.0
>BF01062B2C02
Length = 835
Score = 1604 bits (809), Expect = 0.0
Identities = 828/835 (99%)
Strand = Plus / Plus
Query: 468 caaaatacgttttagtaagtcggacttgtggatatgaagtgtgttttgattttgttttgt 527
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaataccttttagtaagtcggacttgtggatatgaagtgtgttttgattttgttttgt 60
Query: 528 tatttctcctacattagtgcgtggggtcgcggggatttagaaaaatatggtcctttccag 587
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 tatttcacctacattagtgcgtggggtcgcggggatttagaaaaatatggtccattccag 120
Query: 588 ttagcactgcattcgaaattaattaaatgcgatcacgacagaaatctgaatttagacgtc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagcactgcattcgaaattaattaaatgcgatcacgacagaaatctgaatttagacgtc 180
Query: 648 agcggcatagacgtatatttctacgattttccaagaaacgacgtggaaacttttacaatt 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcggcatagacgtatatttctacgattttccaagaaacgacgtggaaacttttacaatt 240
Query: 708 gacaacgctgcgagaggaatcctcgacataaaggaactcgataaaacgaggaaattcatt 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacaacgctgcgagaggaatcctcgacataaaggaactcgataaaacgaggaaattcatt 300
Query: 768 atattcgttgctggatacaaatccaatatcaataaaagaaccgaggaaagagttagggat 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atattcgttgctggatacaaatccaatatcaataaaagaaccgaggaaagagttagggat 360
Query: 828 acttttagaaattatccaaacagctacttgattatcctcgaccattcagaatacacgaac 887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttttagaaattatccaaacagctacttgattatcctcgaccattcagaatacacgaat 420
Query: 888 gataagcaaggaaatatcaaaagctatgaaagatcagttaaatacgtattttatattgga 947
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 421 gataagcaaggaaatatcaaaagctatgaaagatcagttaaatacgtcttttatattgga 480
Query: 948 agggcattagctcatatgctagtacgcttagaggaaggcggcatatctcccaaaaatata 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agggcattagctcatatgctagtacgcttagaggaaggcggcatatctcccaaaaatata 540
Query: 1008 cactgcatcggtcatagtttgggttcccagattttaggcaatactggagaaatcttttat 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cactgcatcggtcatagtttgggttcccagattttaggcaatactggagaaatcttttat 600
Query: 1068 aatataactgggaagaagattgcaaggattacggctctggacccagccgggccttgtttt 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatataactgggaagaagattgcaaggattacggctctggacccagccgggccttgtttt 660
Query: 1128 tctaatagcctaatacaagaacaagtgaggtctggcgttgcagattatgttgaagtatat 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctaatagcctaatacaagaacaagtgaggtctggcgttgcagattatgttgaagtatat 720
Query: 1188 cactgtaatgcagggggattggggacaactagtgttctaggagacgtagatttcttcgta 1247
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 721 cactgtaatgcagggggattggggacaactagtgttctaggagacgtnnatttcttcgta 780
Query: 1248 aacaaaaagggccaaagccaaccgaaatgcgggactccactaataccaggtgtat 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aacaaaaagggccaaagccaaccgaaatgcgggactccactaataccaggtgtat 835
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 323,923
Number of extensions: 20470
Number of successful extensions: 20470
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20470
Number of HSP's successfully gapped: 1
Length of query: 2023
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2006
Effective length of database: 8,119,229
Effective search space: 16287173374
Effective search space used: 16287173374
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)