BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19374 (UTR included)
(1399 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A2G08 862 0.0
>BF01041A2G08
Length = 780
Score = 862 bits (435), Expect = 0.0
Identities = 444/447 (99%)
Strand = Plus / Plus
Query: 472 tgacgccgaaagctctaaaataatccaaaatgagtgaaggcacagccactattcgcactc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgacgccgaaagctctaaaataatccaaaatgagtgaaggcacagccactattcgcactc 69
Query: 532 gcaaatttatgaccaacagattgttggcgcgcaagcagatggtctgcgatgtccttcatc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 70 gcaaatttatgaccaacagattgttggcgcgcaagcagatggtctgcgatgtcctacatc 129
Query: 592 caggaaaacccactgttagtaaaactgagatccgtgagaagctcgcgaagatgtacaagg 651
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cagggaaacctactgttagtaaaactgagatccgtgagaagctcgcgaagatgtacaagg 189
Query: 652 tgacgccagacgttgtcttcgtatttggtttcaaaacgaacttcggtggtggaaaatcca 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgacgccagacgttgtcttcgtatttggtttcaaaacgaacttcggtggtggaaaatcca 249
Query: 712 ctggtttcgccttaatatacgacactctggatctggctaaaaagtttgagcccaaacaca 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctggtttcgccttaatatacgacactctggatctggctaaaaagtttgagcccaaacaca 309
Query: 772 gacttgctcgccacggactgtatgagaagaagaggccgacacgcaaacagcgtaaggaac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gacttgctcgccacggactgtatgagaagaagaggccgacacgcaaacagcgtaaggaac 369
Query: 832 gtaagaacaggatgaagaaggtgcgtggtaccaagaaatccaaggtcggagctgcgtcta 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gtaagaacaggatgaagaaggtgcgtggtaccaagaaatccaaggtcggagctgcgtcta 429
Query: 892 agaagtgatgtgacactatcataattg 918
|||||||||||||||||||||||||||
Sbjct: 430 agaagtgatgtgacactatcataattg 456
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,672
Number of extensions: 6485
Number of successful extensions: 6485
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6485
Number of HSP's successfully gapped: 1
Length of query: 1399
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1382
Effective length of database: 8,119,229
Effective search space: 11220774478
Effective search space used: 11220774478
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)