BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19380 (UTR included)
(1609 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 127 6e-29
BF01011A1H06 119 1e-26
BF01052B1F12 111 4e-24
BF01017A2H11 101 3e-21
BF01025A1D01 94 8e-19
BF14_729_C3 82 3e-15
BF01050A2E08 78 5e-14
BF01058B2C06 70 1e-11
>BF14_729_C2
Length = 1289
Score = 127 bits (64), Expect = 6e-29
Identities = 89/96 (92%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 1339 gttgctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacg 1398
||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||
Sbjct: 549 gttgctgaaaagtaaccgaaacgtcgggagtatgtag-tttttaacaaaaataaagcacg 607
Query: 1399 cgtagtatatccgaaaaatattagtttcatttaaat 1434
|||||| |||||||| ||| |||||||||||||||
Sbjct: 608 cgtagtttatccgaataattctagtttcatttaaat 643
Score = 73.8 bits (37), Expect = 8e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 1387 aaataaagcacgcgtagtatatccgaaaaatattagtttcattta 1431
||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 503 aaataaagcacgcgtagtatatccgaatactattagtttcattta 459
>BF01011A1H06
Length = 739
Score = 119 bits (60), Expect = 1e-26
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1343 ctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacgcgta 1402
||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||||||||
Sbjct: 485 ctgaaaagtaaccgaaacgtcgggagtatgtag-tcttttacaaaaataaatcacgcgta 543
Query: 1403 gtatatccgaaaaatattagtttcatttaaat 1434
|| ||||||||||||| ||| |||||||||||
Sbjct: 544 gtttatccgaaaaatactagattcatttaaat 575
>BF01052B1F12
Length = 785
Score = 111 bits (56), Expect = 4e-24
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 1339 gttgctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacg 1398
||||||||||||| |||| ||| |||||||||||||| || ||||| ||||||| |||
Sbjct: 423 gttgctgaaaagtcaccgtaacatcgggagtatgtagcttccttacaaaaataaaagacg 364
Query: 1399 cgtagtatatccgaaaaatattagtttcatttaaat 1434
|| |||||||||||||||||||||||||||||||||
Sbjct: 363 cgaagtatatccgaaaaatattagtttcatttaaat 328
Score = 83.8 bits (42), Expect = 8e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 1350 gtaaccgaaacgtcgggagtatgtagattttttacataaa-taaagcacgcgtagtatat 1408
|||||||||||||| ||||||||||| |||||| | ||| || |||||||||||||| |
Sbjct: 489 gtaaccgaaacgtctggagtatgtagttttttttaaaaaactagagcacgcgtagtatgt 548
Query: 1409 ccgaaaaatattagtttcatttaaat 1434
||||||||| || |||||||||||||
Sbjct: 549 ccgaaaaatgttggtttcatttaaat 574
>BF01017A2H11
Length = 713
Score = 101 bits (51), Expect = 3e-21
Identities = 87/97 (89%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 1339 gttgctgaaaagtaaccgaaacgtcgggagtatgt-agattttttacataaataaagcac 1397
||||||||||||||||| ||||||||||||||| || ||||||||| |||||||||||
Sbjct: 54 gttgctgaaaagtaaccaaaacgtcgggagtatnnnagtttttttacaaaaataaagcac 113
Query: 1398 gcgtagtatatccg-aaaaatattagtttcatttaaa 1433
||||||| |||||| |||||| || ||||||||||||
Sbjct: 114 gcgtagtttatccgaaaaaatgttggtttcatttaaa 150
>BF01025A1D01
Length = 764
Score = 93.7 bits (47), Expect = 8e-19
Identities = 85/96 (88%), Gaps = 5/96 (5%)
Strand = Plus / Minus
Query: 1339 gttgctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacg 1398
|||||||||||||||||||||||||||||| |||| |||| ||| || |||||||||
Sbjct: 463 gttgctgaaaagtaaccgaaacgtcgggagcctgtaa--ttttaacaaaattaaagcacg 406
Query: 1399 cgtagtatatccgaaaaatattagtttcatttaaat 1434
|||| |||||||||||||||||||||||||||||
Sbjct: 405 cgta---tatccgaaaaatattagtttcatttaaat 373
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 3e-15
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 1339 gttgctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacg 1398
||||||| ||||||||||||||||||||| ||||||| |||||| || |||||| ||
Sbjct: 1609 gttgctgcaaagtaaccgaaacgtcgggattatgtag--tttttaaat-aataaaatccg 1665
Query: 1399 cgtagtatatccgaaaaatattagtttcatttaaat 1434
||||||||||||||| |||| ||| |||||||||||
Sbjct: 1666 cgtagtatatccgaataatactagcttcatttaaat 1701
>BF01050A2E08
Length = 813
Score = 77.8 bits (39), Expect = 5e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1343 ctgaaaagtaaccgaaacgtcgggagtatgtagattttttacataaataaagcacgcgta 1402
|||||||||||||||||||||||||||||| || |||| ||| ||||||| |||| |||
Sbjct: 143 ctgaaaagtaaccgaaacgtcgggagtatggag-ttttaaacaaaaataaatcacgtgta 201
Query: 1403 gtatatccgaaaaatatta 1421
|||||| || |||||||||
Sbjct: 202 gtatatacggaaaatatta 220
>BF01058B2C06
Length = 772
Score = 69.9 bits (35), Expect = 1e-11
Identities = 77/86 (89%), Gaps = 5/86 (5%)
Strand = Plus / Minus
Query: 1347 aaagtaaccgaaacgtcgggagtatgtagattttttac-ataaataaagcacgcgtagta 1405
||||||||||||||||||||| ||||||| |||| || | |||||||||||||||||||
Sbjct: 453 aaagtaaccgaaacgtcgggaatatgtag--ttttaacaaaaaataaagcacgcgtagta 396
Query: 1406 tatccgaaaaatattagtttcattta 1431
||| | |||||||||||||||||||
Sbjct: 395 -atcag-aaaatattagtttcattta 372
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 266,839
Number of extensions: 6508
Number of successful extensions: 6508
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 6498
Number of HSP's successfully gapped: 10
Length of query: 1609
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1592
Effective length of database: 8,119,229
Effective search space: 12925812568
Effective search space used: 12925812568
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)