BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN19384 (UTR included)
(1424 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B2G01 1148 0.0
BF01043A1C11 726 0.0
BF01039B2C07 254 3e-67
BF01018B2A11 170 4e-42
BF01016B1A11 165 2e-40
BF01056B1D01 159 1e-38
BF01030A2C06 159 1e-38
>BF01039B2G01
Length = 766
Score = 1148 bits (579), Expect = 0.0
Identities = 612/623 (98%)
Strand = Plus / Plus
Query: 253 gctgcctgtaaattatacaatggaagaaccagacaaacatatacgtgaagcattgaaaca 312
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gctgcctgtaaattataaaatggaagaaccagacaaacatatacgtgaagcattgaaaca 203
Query: 313 aattattagtccaatttaattgacgccatcgtatgagatacgatgactttttaaaaatag 372
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 aattattagtccaatttaattgacgccatcgtatgaaatacgatgactttttaaaaatag 263
Query: 373 aactctgtatataaatataatttatttaaattaaaaaaaaaaacacacacacaaccaaag 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aactctgtatataaatataatttatttaaattaaaaaaaaaaacacacacacaaccaaag 323
Query: 433 acaagtagatgtttattgatctatggaacagcttgaaaagtgtaatcggtagagacatga 492
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 324 acaagtagatgtttattgatctatggaacagcttgaaaagtataatcggtagagatatgt 383
Query: 493 ctgcgacgatggtggacactcccccgcctgaactcatcaccaccatagagtggggcatga 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgcgacgatggtggacactcccccgcctgaactcatcaccaccatagagtggggcatga 443
Query: 553 tggataagagcaagttttttccactgtacagcctgagtgggttcacagttcgttgcgcac 612
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 444 tggataagagcaagttttttccattgtacagcctgagtggattcacagttcgttgcgcac 503
Query: 613 tgtatccgctaacattaataaagactcagattcaagtgcaacggaaaagggatgcgtata 672
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 504 tgtatccgctaacattaataaagacacagatacaagtgcaacggaaaagggatgcgtata 563
Query: 673 aaggagtgtatgacgccatatccaagatttacgctaacgagggtgtttccggtttgtaca 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaggagtgtatgacgccatatccaagatttacgctaacgagggtgtttccggtttgtaca 623
Query: 733 ggggattctggatgtctaattttcagataatatcaggcgttttctatataacaacttacg 792
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 624 gaggattctggatgtctaattttcagataatatcaggcgttttctatataacaacgtacg 683
Query: 793 agggtgtgagacacgaactcggcaagcacgagataaacccacgactgaagtcgttcatag 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agggtgtgagacacgaactcggcaagcacgagataaacccacgactgaagtcgttcatag 743
Query: 853 ccggcggctgcgcgtcactcgtc 875
|||||||||||||||||||||||
Sbjct: 744 ccggcggctgcgcgtcactcgtc 766
>BF01043A1C11
Length = 755
Score = 726 bits (366), Expect = 0.0
Identities = 394/402 (98%), Gaps = 1/402 (0%)
Strand = Plus / Plus
Query: 251 cagctgcctgtaaattatacaatggaagaaccagacaaacatatacgtgaagcattgaaa 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cagctgcctgtaaattatacaatggaagaaccagacaaacatatacgtgaagcattgaaa 414
Query: 311 caaattattagtccaatttaattgacgccatcgtatgagatacgatgactttttaaaaat 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 caaattattagtccaatttaattgacgccatcgtatgagatacgatgactttttaaaaat 474
Query: 371 agaactctgtatataaatataatttatttaaattaaaaaaaaaaacacacacacaaccaa 430
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 475 agaactctgtatataaatataatttatttaaattaaaa-aaaaaacacacacacaaccaa 533
Query: 431 agacaagtagatgtttattgatctatggaacagcttgaaaagtgtaatcggtagagacat 490
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||
Sbjct: 534 agacaagtagatgtttattgatctatggaacagcctgaaaagtataatcggtagagatat 593
Query: 491 gactgcgacgatggtggacactcccccgcctgaactcatcaccaccatagagtggggcat 550
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 594 gactgcgacgatggtggacactcctccgcctgaactcatcaccaccatagagtggggcat 653
Query: 551 gatggataagagcaagttttttccactgtacagcctgagtgggttcacagttcgttgcgc 610
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 654 gatggataagagcaagttttttccactgtacagtctgagtgggttcacagttcgttgcgc 713
Query: 611 actgtatccgctaacattaataaagactcagattcaagtgca 652
||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 714 actgtatccgctaacattaataaagacacagatacaagtgca 755
>BF01039B2C07
Length = 792
Score = 254 bits (128), Expect = 3e-67
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 841 agtcgttcatagccggcggctgcgcgtcactcgtcggacagacggtgatagttcctttcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agtcgttcatagccggcggctgcgcgtcactcgtcggacagacggtgatagttcctttcg 462
Query: 901 atgtcctaagccagcacctgatggtgctcggtctcgtgaaaggctcagcagagaacacca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atgtcctaagccagcacctgatggtgctcggtctcgtgaaaggctcagcagagaacacca 522
Query: 961 ggaatccg 968
||||||||
Sbjct: 523 ggaatccg 530
>BF01018B2A11
Length = 733
Score = 170 bits (86), Expect = 4e-42
Identities = 116/126 (92%)
Strand = Plus / Minus
Query: 16 cttccttttcaagcctacatcagtatctgtaaattactttttaaatcatttaaatcgggc 75
|||| ||||||||||||||||| | ||| |||||||||||||||||||||||||||||||
Sbjct: 539 cttcgttttcaagcctacatcactttctttaaattactttttaaatcatttaaatcgggc 480
Query: 76 gtaccatttgaaagttatcataatataagtttaaaaattctctaaattaaataggctatt 135
||||| |||||||| ||||||||||||| ||||||||| ||| ||||||||||||| |||
Sbjct: 479 gtaccgtttgaaaggtatcataatataaatttaaaaatgctcaaaattaaataggccatt 420
Query: 136 ttatat 141
||||||
Sbjct: 419 ttatat 414
>BF01016B1A11
Length = 786
Score = 165 bits (83), Expect = 2e-40
Identities = 125/139 (89%)
Strand = Plus / Minus
Query: 45 taaattactttttaaatcatttaaatcgggcgtaccatttgaaagttatcataatataag 104
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 166 taaattactttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataag 107
Query: 105 tttaaaaattctctaaattaaataggctattttatatttcttgtaaatagccagcgcgaa 164
|||| ||||||| ||||||||||||||||||||||||| || |||| ||| | |||||
Sbjct: 106 tttagtaattctcaaaattaaataggctattttatattttttctaaagtgcccgtgcgaa 47
Query: 165 gtcggtgctggttcctagt 183
| ||| |||||| ||||||
Sbjct: 46 gccggggctggtacctagt 28
>BF01056B1D01
Length = 838
Score = 159 bits (80), Expect = 1e-38
Identities = 121/134 (90%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 21 ttttcaagcctacatcagtatctgtaaattactttttaaatcatttaaatcgggcgtacc 80
|||| |||||||||||| |||||||||||||||||||||||||||||| || ||||||||
Sbjct: 446 tttttaagcctacatcactatctgtaaattactttttaaatcatttaagtcaggcgtacc 387
Query: 81 atttgaaagttatcataatataagt---ttaaaaattctctaaattaaataggctatttt 137
||||| ||||||||||||||||||| ||| ||||||| |||||||| ||||||||||
Sbjct: 386 atttgcaagttatcataatataagtctaataataattctcaaaattaaaaaggctatttt 327
Query: 138 atatttcttgtaaa 151
|||||| |||||||
Sbjct: 326 atattttttgtaaa 313
>BF01030A2C06
Length = 599
Score = 159 bits (80), Expect = 1e-38
Identities = 115/126 (91%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 21 ttttcaagcctacatcagtatctgtaaattactttttaaatcatttaaatcgggcgtacc 80
|||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 128 tttttaagcctacatcactatctgtaaattactttttaaatcatttaaatcaggcgtacc 69
Query: 81 atttgaaagttatcataatataagtt---taaaaattctctaaattaaataggctatttt 137
||||| |||||||||||||||||||| ||| ||| ||| |||||||| ||||||||||
Sbjct: 68 atttgcaagttatcataatataagtttaataataatcctcaaaattaaaaaggctatttt 9
Query: 138 atattt 143
||||||
Sbjct: 8 atattt 3
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 235,712
Number of extensions: 16748
Number of successful extensions: 16748
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 16745
Number of HSP's successfully gapped: 7
Length of query: 1424
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1407
Effective length of database: 8,119,229
Effective search space: 11423755203
Effective search space used: 11423755203
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)